RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 PPIGQ13427 754 aaKnown RBP eCLIP18.44■□□□□ 0.544e-25■■□□□ 13.8
COL9A3-205ENST00000466192 ALG1LQ6GMV1 187 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 TMC7Q7Z402 723 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 SETD3Q86TU7 594 aaPredicted RBP18.44■□□□□ 0.54
COL9A3-205ENST00000466192 ARID3BQ8IVW6 561 aaPredicted RBP18.44■□□□□ 0.54
COL9A3-205ENST00000466192 DENND6AQ8IWF6 608 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 PLD6Q8N2A8 252 aaKnown RBP18.44■□□□□ 0.54
COL9A3-205ENST00000466192 RAB3IL1Q8TBN0 382 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 RANBP9Q96S59 729 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 DDX50Q9BQ39 737 aaKnown RBP18.44■□□□□ 0.54
COL9A3-205ENST00000466192 LRRC3Q9BY71 257 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 ACE2Q9BYF1 805 aaPredicted RBP18.44■□□□□ 0.54
COL9A3-205ENST00000466192 PRKD2Q9BZL6 878 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 NSMCE4AQ9NXX6 385 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 MARCOQ9UEW3 520 aaPredicted RBP18.44■□□□□ 0.54
COL9A3-205ENST00000466192 ASB3Q9Y575 518 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 CPQQ9Y646 472 aa18.44■□□□□ 0.54
COL9A3-205ENST00000466192 HEATR9A2RTY3 570 aa18.43■□□□□ 0.54
COL9A3-205ENST00000466192 NRG2O14511 850 aaPredicted RBP18.43■□□□□ 0.54
COL9A3-205ENST00000466192 AHSGP02765 367 aa18.43■□□□□ 0.54
COL9A3-205ENST00000466192 PROCP04070 461 aa18.43■□□□□ 0.54
COL9A3-205ENST00000466192 NQO1P15559 274 aaKnown RBP18.43■□□□□ 0.54
COL9A3-205ENST00000466192 FPGSQ05932 587 aa18.43■□□□□ 0.54
COL9A3-205ENST00000466192 CTBP1Q13363 440 aa18.43■□□□□ 0.54
COL9A3-205ENST00000466192 INSCQ1MX18 579 aa18.43■□□□□ 0.54
COL9A3-205ENST00000466192 KIAA0930Q6ICG6 404 aaPredicted RBP18.43■□□□□ 0.54
COL9A3-205ENST00000466192 ASRGL1Q7L266 308 aa18.43■□□□□ 0.54
COL9A3-205ENST00000466192 ZC3HC1Q86WB0 502 aaKnown RBP18.43■□□□□ 0.54
COL9A3-205ENST00000466192 TMC8Q8IU68 726 aa18.43■□□□□ 0.54
COL9A3-205ENST00000466192 MGME1Q9BQP7 344 aa18.43■□□□□ 0.54
COL9A3-205ENST00000466192 TXLNGQ9NUQ3 528 aa18.43■□□□□ 0.54
COL9A3-205ENST00000466192 UBA2Q9UBT2 640 aaPredicted RBP18.43■□□□□ 0.54
COL9A3-205ENST00000466192 HAO1Q9UJM8 370 aa18.43■□□□□ 0.54
COL9A3-205ENST00000466192 MYO7AQ13402 2215 aa18.43■□□□□ 0.54
COL9A3-205ENST00000466192 A0A096LPK6 155 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 LCHNA4D1U4 455 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 SNNO75324 88 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-205ENST00000466192 CSPG5O95196 566 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 SAT1P21673 171 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 SKIV2L2P42285 1042 aaKnown RBP18.42■□□□□ 0.54
COL9A3-205ENST00000466192 ERVFC1P60507 584 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 ELF3P78545 371 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-205ENST00000466192 MPP1Q00013 466 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 IRF9Q00978 393 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 GRM3Q14832 879 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 PCLAFQ15004 111 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 RNF219Q5W0B1 726 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-205ENST00000466192 CLNKQ7Z7G1 428 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 NSMCE3Q96MG7 304 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 TMEM237Q96Q45 408 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 PSKH2Q96QS6 385 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 RHOJQ9H4E5 214 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 FBXO6Q9NRD1 293 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-205ENST00000466192 SEPT3Q9UH03 358 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 SLC39A10Q9ULF5 831 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 SIN3BO75182 1162 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 CBX6O95503 412 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 LATS1O95835 1130 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 LRG1P02750 347 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 C8AP07357 584 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 PAMP19021 973 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 SERPINB3P29508 390 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 RGRP47804 291 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 FSCBQ5H9T9 825 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 TMEM240Q5SV17 173 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 TSTD2Q5T7W7 516 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 MBLAC2Q68D91 279 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 Q6ZNB5 142 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 UBE2Q1Q7Z7E8 422 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 CRLF3Q8IUI8 442 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 C10orf107Q8IVU9 208 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 TNS4Q8IZW8 715 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 MAB21L3Q8N8X9 362 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 GPR22Q99680 433 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 THAP1Q9NVV9 213 aa18.42■□□□□ 0.54
COL9A3-205ENST00000466192 PDE4DIPQ5VU43 2346 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 CBX4O00257 560 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 TBL1XO60907 577 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 C1RP00736 705 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 C2P06681 752 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 ADH1AP07327 375 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 CHRM1P11229 460 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-205ENST00000466192 FGF3P11487 239 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-205ENST00000466192 SLC1A2P43004 574 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 PGGT1BP53609 377 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 ZBTB16Q05516 673 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 CDK18Q07002 472 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 ARMC3Q5W041 872 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 BBS5Q8N3I7 341 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 TTC16Q8NEE8 873 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 OR13J1Q8NGT2 312 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 IFT43Q96FT9 208 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 FEM1CQ96JP0 617 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 TCF25Q9BQ70 676 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 CINPQ9BW66 212 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-205ENST00000466192 MUC3BQ9H195 1237 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 ARHGEF3Q9NR81 526 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 COPG2Q9UBF2 871 aa18.41■□□□□ 0.54
COL9A3-205ENST00000466192 HELZP42694 1942 aaKnown RBP18.41■□□□□ 0.54
COL9A3-205ENST00000466192 MROH6A6NGR9 719 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms