RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 OR52K2Q8NGK3 314 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 STYXQ8WUJ0 223 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 HDAC10Q969S8 669 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 TUBGCP5Q96RT8 1024 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 UBE2OQ9C0C9 1292 aaKnown RBP16.5■□□□□ 0.23
SLX4-202ENST00000466154 ALG9Q9H6U8 611 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 ANKRD6Q9Y2G4 727 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 PDCD11Q14690 1871 aaKnown RBP16.5■□□□□ 0.23
SLX4-202ENST00000466154 CCND3P30281 292 aaPredicted RBP16.5■□□□□ 0.23
SLX4-202ENST00000466154 MAPRE1Q15691 268 aaKnown RBP16.5■□□□□ 0.23
SLX4-202ENST00000466154 CLEC6AQ6EIG7 209 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 GLB1LQ6UWU2 654 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 TMEM151AQ8N4L1 468 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 RTL3Q8N8U3 475 aaKnown RBP16.5■□□□□ 0.23
SLX4-202ENST00000466154 OR6Y1Q8NGX8 325 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 ISL2Q96A47 359 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 HAPLN3Q96S86 360 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 NMRK2Q9NPI5 230 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 NCKIPSDQ9NZQ3 722 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 CCDC167Q9P0B6 97 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 UXTQ9UBK9 157 aaPredicted RBP16.5■□□□□ 0.23
SLX4-202ENST00000466154 DSEQ9UL01 958 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 NEU3Q9UQ49 428 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 ACTL7AQ9Y615 435 aa16.5■□□□□ 0.23
SLX4-202ENST00000466154 RGSL1A5PLK6 1076 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 NT5C1B-RDH14C9J2C7 533 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 FGF10O15520 208 aaPredicted RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 TADA2AO75478 443 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 ALOX15P16050 662 aaPredicted RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 XRCC1P18887 633 aaPredicted RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 ARCN1P48444 511 aaKnown RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 MGAT5BQ3V5L5 792 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 BRMS1LQ5PSV4 323 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 LSMEM2Q8N112 164 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 GBP5Q96PP8 586 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 IL12RB2Q99665 862 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 TSR3Q9UJK0 312 aaKnown RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 MKI67P46013 3256 aaKnown RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 SCAMP3O14828 347 aaKnown RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 CCNT2O60583 730 aaKnown RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 SUPT7LO94864 414 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 PPARGP37231 505 aaPredicted RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 CDH13P55290 713 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 GALNT3Q14435 633 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 PPP1R3AQ16821 1122 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 TMCO4Q5TGY1 634 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 TIGD7Q6NT04 549 aaPredicted RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 POTEHQ6S545 545 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 SPATA24Q86W54 205 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 SMOC2Q9H3U7 446 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 Q9Y3F1 56 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 MAGEA13PA6NCF6 341 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 CAPN8A6NHC0 703 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 GPC4O75487 556 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 SERPINH1P50454 418 aaKnown RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 FAM83EQ2M2I3 478 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 TSTD2Q5T7W7 516 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 GPR158Q5T848 1215 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 BNC2Q6ZN30 1099 aaPredicted RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 GALNT4Q8N4A0 578 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 SERPINB11Q96P15 392 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 TSC22D3Q99576 134 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 RTKNQ9BST9 563 aa16.49■□□□□ 0.23
SLX4-202ENST00000466154 COPS7BQ9H9Q2 264 aaPredicted RBP16.49■□□□□ 0.23
SLX4-202ENST00000466154 SLC12A8A0AV02 714 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 MANSC4A6NHS7 340 aaPredicted RBP16.48■□□□□ 0.23
SLX4-202ENST00000466154 AP3B1O00203 1094 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 LIN7AO14910 233 aaPredicted RBP16.48■□□□□ 0.23
SLX4-202ENST00000466154 KIF1CO43896 1103 aaKnown RBP16.48■□□□□ 0.23
SLX4-202ENST00000466154 MYCP01106 439 aaPredicted RBP16.48■□□□□ 0.23
SLX4-202ENST00000466154 GLDCP23378 1020 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 HOXC8P31273 242 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 SOX11P35716 441 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 ARSDP51689 593 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 THEMIS2Q5TEJ8 643 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 SH3RF2Q8TEC5 729 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 FBXO32Q969P5 355 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 EXOC2Q96KP1 924 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 KLHL4Q9C0H6 718 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 WDR41Q9HAD4 459 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 COPG1Q9Y678 874 aaKnown RBP16.48■□□□□ 0.23
SLX4-202ENST00000466154 KCNU1A8MYU2 1149 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 C9JVG2 144 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 H2AFYO75367 372 aaKnown RBP16.48■□□□□ 0.23
SLX4-202ENST00000466154 LYNP07948 512 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 FAM163BP0C2L3 166 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 MLLT6P55198 1093 aaPredicted RBP16.48■□□□□ 0.23
SLX4-202ENST00000466154 PRKCZQ05513 592 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 LZTR1Q8N653 840 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 BHLHE22Q8NFJ8 381 aaPredicted RBP16.48■□□□□ 0.23
SLX4-202ENST00000466154 GIPC2Q8TF65 315 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 ANKRD49Q8WVL7 239 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 TRPC7Q9HCX4 862 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 TNFRSF12AQ9NP84 129 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 HCSTQ9UBK5 93 aa16.48■□□□□ 0.23
SLX4-202ENST00000466154 UNCXA6NJT0 531 aa16.47■□□□□ 0.23
SLX4-202ENST00000466154 RNASEH1O60930 286 aaKnown RBP16.47■□□□□ 0.23
SLX4-202ENST00000466154 HADHAP40939 763 aa16.47■□□□□ 0.23
SLX4-202ENST00000466154 RENBPP51606 427 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms