RNA–Protein interactions for RNA: ENST00000465591.1

LIME1-203, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 2

Gene LIME1, Length 680 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-203ENST00000465591 DFFAO00273 331 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 YKT6O15498 198 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 TSPAN6O43657 245 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 BUB1BO60566 1050 aaPredicted RBP22.04■■□□□ 1.12
LIME1-203ENST00000465591 AMPD1P23109 780 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 INAVAQ3KP66 663 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 POLNQ7Z5Q5 900 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 TTC7BQ86TV6 843 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 MARCH9Q86YJ5 346 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 TSEN2Q8NCE0 465 aaKnown RBP22.04■■□□□ 1.12
LIME1-203ENST00000465591 NSMCE3Q96MG7 304 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 NCAPGQ9BPX3 1015 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 CALN1Q9BXU9 219 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 PACSIN1Q9BY11 444 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 CPEB1Q9BZB8 566 aaKnown RBP22.04■■□□□ 1.12
LIME1-203ENST00000465591 GPR27Q9NS67 375 aa22.04■■□□□ 1.12
LIME1-203ENST00000465591 STAU2Q9NUL3 570 aaKnown RBP eCLIP22.04■■□□□ 1.12
LIME1-203ENST00000465591 NEMP1O14524 444 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 MUSKO15146 869 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 RAD51Q06609 339 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 DNAJC3Q13217 504 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 ASTE1Q2TB18 679 aaPredicted RBP22.03■■□□□ 1.12
LIME1-203ENST00000465591 BOLA3Q53S33 107 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 CCDC157Q569K6 752 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 TPRG1LQ5T0D9 272 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 Q6ZSR6 202 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 ZSWIM9Q86XI8 627 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 CSPG4P5Q96PW8 444 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 PCDH18Q9HCL0 1135 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 KLHL11Q9NVR0 708 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 DKK3Q9UBP4 350 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 IP6K2Q9UHH9 426 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 HS3ST3A1Q9Y663 406 aa22.03■■□□□ 1.12
LIME1-203ENST00000465591 A6NNZ2 444 aa22.02■■□□□ 1.12
LIME1-203ENST00000465591 H3BRJ5 948 aa22.02■■□□□ 1.12
LIME1-203ENST00000465591 MMP20O60882 483 aa22.02■■□□□ 1.12
LIME1-203ENST00000465591 KRT37O76014 449 aa22.02■■□□□ 1.12
LIME1-203ENST00000465591 ZNF135P52742 658 aaPredicted RBP22.02■■□□□ 1.12
LIME1-203ENST00000465591 SPECC1LQ69YQ0 1117 aa22.02■■□□□ 1.12
LIME1-203ENST00000465591 KYAT3Q6YP21 454 aaKnown RBP22.02■■□□□ 1.12
LIME1-203ENST00000465591 PTAR1Q7Z6K3 402 aaPredicted RBP22.02■■□□□ 1.12
LIME1-203ENST00000465591 VSTM4Q8IW00 320 aa22.02■■□□□ 1.12
LIME1-203ENST00000465591 SLC25A45Q8N413 288 aa22.02■■□□□ 1.12
LIME1-203ENST00000465591 TSC1Q92574 1164 aa22.02■■□□□ 1.12
LIME1-203ENST00000465591 CNDP2Q96KP4 475 aaKnown RBP22.02■■□□□ 1.12
LIME1-203ENST00000465591 DNAJC7Q99615 494 aa22.02■■□□□ 1.12
LIME1-203ENST00000465591 SP110Q9HB58 689 aa22.02■■□□□ 1.12
LIME1-203ENST00000465591 UCKL1Q9NWZ5 548 aa22.02■■□□□ 1.12
LIME1-203ENST00000465591 IPO11Q9UI26 975 aaKnown RBP22.02■■□□□ 1.12
LIME1-203ENST00000465591 TSPAN11A1L157 253 aa22.01■■□□□ 1.11
LIME1-203ENST00000465591 ENC1O14682 589 aa22.01■■□□□ 1.11
LIME1-203ENST00000465591 PALMO75781 387 aa22.01■■□□□ 1.11
LIME1-203ENST00000465591 LDOC1O95751 146 aaPredicted RBP22.01■■□□□ 1.11
LIME1-203ENST00000465591 TPM3P06753 285 aa22.01■■□□□ 1.11
LIME1-203ENST00000465591 IL10RBQ08334 325 aa22.01■■□□□ 1.11
LIME1-203ENST00000465591 SGCGQ13326 291 aa22.01■■□□□ 1.11
LIME1-203ENST00000465591 ZNF542PQ5EBM4 170 aa22.01■■□□□ 1.11
LIME1-203ENST00000465591 CCNI2Q6ZMN8 369 aaPredicted RBP22.01■■□□□ 1.11
LIME1-203ENST00000465591 CAMK1DQ8IU85 385 aa22.01■■□□□ 1.11
LIME1-203ENST00000465591 ZNF564Q8TBZ8 553 aaPredicted RBP22.01■■□□□ 1.11
LIME1-203ENST00000465591 TEKT4Q8WW24 435 aa22.01■■□□□ 1.11
LIME1-203ENST00000465591 ASB12Q8WXK4 309 aa22.01■■□□□ 1.11
LIME1-203ENST00000465591 LENG8Q96PV6 779 aaPredicted RBP22.01■■□□□ 1.11
LIME1-203ENST00000465591 WRAP53Q9BUR4 548 aaKnown RBP22.01■■□□□ 1.11
LIME1-203ENST00000465591 SUV39H2Q9H5I1 410 aa22.01■■□□□ 1.11
LIME1-203ENST00000465591 WDFY3Q8IZQ1 3526 aa22.01■■□□□ 1.11
LIME1-203ENST00000465591 TRIM38O00635 465 aa22■■□□□ 1.11
LIME1-203ENST00000465591 CBFA2T2O43439 604 aa22■■□□□ 1.11
LIME1-203ENST00000465591 PEX11BO96011 259 aa22■■□□□ 1.11
LIME1-203ENST00000465591 PRKCGP05129 697 aa22■■□□□ 1.11
LIME1-203ENST00000465591 CD48P09326 243 aa22■■□□□ 1.11
LIME1-203ENST00000465591 IL4RP24394 825 aa22■■□□□ 1.11
LIME1-203ENST00000465591 ARL4AP40617 200 aa22■■□□□ 1.11
LIME1-203ENST00000465591 SEMG2Q02383 582 aa22■■□□□ 1.11
LIME1-203ENST00000465591 MMRN1Q13201 1228 aa22■■□□□ 1.11
LIME1-203ENST00000465591 FZD2Q14332 565 aa22■■□□□ 1.11
LIME1-203ENST00000465591 SLC18A3Q16572 532 aa22■■□□□ 1.11
LIME1-203ENST00000465591 ATP13A4Q4VNC1 1196 aa22■■□□□ 1.11
LIME1-203ENST00000465591 DHRS13Q6UX07 377 aa22■■□□□ 1.11
LIME1-203ENST00000465591 TMPRSS7Q7RTY8 843 aa22■■□□□ 1.11
LIME1-203ENST00000465591 SRLQ86TD4 932 aa22■■□□□ 1.11
LIME1-203ENST00000465591 ZSCAN30Q86W11 494 aa22■■□□□ 1.11
LIME1-203ENST00000465591 KDF1Q8NAX2 398 aaPredicted RBP22■■□□□ 1.11
LIME1-203ENST00000465591 OR8K1Q8NGG5 319 aa22■■□□□ 1.11
LIME1-203ENST00000465591 CENPTQ96BT3 561 aa22■■□□□ 1.11
LIME1-203ENST00000465591 TTC24A2A3L6 582 aaPredicted RBP21.99■■□□□ 1.11
LIME1-203ENST00000465591 MYO1FO00160 1098 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 PIAS2O75928 621 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 GIMD1P0DJR0 217 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 DGKAP23743 735 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 IGFALSP35858 605 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 CSNK1DP48730 415 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 ARSEP51690 589 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 CLDN6P56747 220 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 SLC10A7Q0GE19 358 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 LZTR1Q8N653 840 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 CHP1Q99653 195 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 CINPQ9BW66 212 aaPredicted RBP21.99■■□□□ 1.11
LIME1-203ENST00000465591 PCDH12Q9NPG4 1184 aa21.99■■□□□ 1.11
LIME1-203ENST00000465591 MBNL1Q9NR56 388 aaKnown RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms