RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SUSD2Q9UGT4 822 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 GGT7Q9UJ14 662 aa17.89■□□□□ 0.45
VPS52-214ENST00000463486 PLXNA2O75051 1894 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 SHROOM3Q8TF72 1996 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.88■□□□□ 0.45
VPS52-214ENST00000463486 A0A1W2PQU0 124 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 A0A1W2PR77 199 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 TM4SF5O14894 197 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 WNT1P04628 370 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 CFIP05156 583 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 ENGP17813 658 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 MX2P20592 715 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 HSPA9P38646 679 aaKnown RBP17.88■□□□□ 0.45
VPS52-214ENST00000463486 MMP13P45452 471 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 RENBPP51606 427 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 LIMK1P53667 647 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 CCDC15Q0P6D6 951 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 LLGL1Q15334 1064 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 TFDP3Q5H9I0 405 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 MARC1Q5VT66 337 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 SEL1L3Q68CR1 1132 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 ALG1LQ6GMV1 187 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 FBXL19Q6PCT2 694 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 HORMAD1Q86X24 394 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 RNF10Q8N5U6 811 aaKnown RBP17.88■□□□□ 0.45
VPS52-214ENST00000463486 C12orf50Q8NA57 414 aaPredicted RBP17.88■□□□□ 0.45
VPS52-214ENST00000463486 SNX19Q92543 992 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 RAB7BQ96AH8 199 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 RMDN1Q96DB5 314 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 NUDCD1Q96RS6 583 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 NOD2Q9HC29 1040 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 TPX2Q9ULW0 747 aaKnown RBP17.88■□□□□ 0.45
VPS52-214ENST00000463486 ITM2BQ9Y287 266 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 HEY1Q9Y5J3 304 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 CAPN6Q9Y6Q1 641 aa17.88■□□□□ 0.45
VPS52-214ENST00000463486 CNOT1A5YKK6 2376 aaKnown RBP17.88■□□□□ 0.45
VPS52-214ENST00000463486 ARHGAP33O14559 1287 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 CST8O60676 142 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 GNSP15586 552 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 PECAM1P16284 738 aaPredicted RBP17.87■□□□□ 0.45
VPS52-214ENST00000463486 ZFXP17010 805 aaPredicted RBP17.87■□□□□ 0.45
VPS52-214ENST00000463486 MAT2AP31153 395 aaKnown RBP17.87■□□□□ 0.45
VPS52-214ENST00000463486 CSNK1EP49674 416 aaKnown RBP17.87■□□□□ 0.45
VPS52-214ENST00000463486 SCNN1BP51168 640 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 NAP1L1P55209 391 aaKnown RBP17.87■□□□□ 0.45
VPS52-214ENST00000463486 MAXP61244 160 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 AP1S1P61966 158 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 RACK1P63244 317 aaKnown RBP17.87■□□□□ 0.45
VPS52-214ENST00000463486 FGL2Q14314 439 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 ZNF235Q14590 738 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 GRM3Q14832 879 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 PPP2R5EQ16537 467 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 RSPO4Q2I0M5 234 aaPredicted RBP17.87■□□□□ 0.45
VPS52-214ENST00000463486 AASDHQ4L235 1098 aaPredicted RBP17.87■□□□□ 0.45
VPS52-214ENST00000463486 LRRC73Q5JTD7 316 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 FAM182AQ5T1J6 154 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 STPG1Q5TH74 334 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 ZNF662Q6ZS27 426 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 RFX6Q8HWS3 928 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 TXLNBQ8N3L3 684 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 CNTD1Q8N815 330 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 SLC6A18Q96N87 628 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 IL12RB2Q99665 862 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 C1QTNF2Q9BXJ5 285 aa17.87■□□□□ 0.45
VPS52-214ENST00000463486 NUSAP1Q9BXS6 441 aaKnown RBP17.87■□□□□ 0.45
VPS52-214ENST00000463486 MAK16Q9BXY0 300 aaKnown RBP17.87■□□□□ 0.45
VPS52-214ENST00000463486 ADAMTS9Q9P2N4 1935 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 CCDC66A2RUB6 948 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 DDX3YO15523 660 aaKnown RBP17.86■□□□□ 0.45
VPS52-214ENST00000463486 HTRA2O43464 458 aaPredicted RBP17.86■□□□□ 0.45
VPS52-214ENST00000463486 TSPAN6O43657 245 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 CCNB1P14635 433 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 PTPN7P35236 360 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 GRIA4P48058 902 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 NR2C2P49116 596 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 AFF3P51826 1226 aaKnown RBP17.86■□□□□ 0.45
VPS52-214ENST00000463486 DYNLT1P63172 113 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 IFI35P80217 286 aaPredicted RBP17.86■□□□□ 0.45
VPS52-214ENST00000463486 TFDP2Q14188 446 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 UGP2Q16851 508 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 LAYNQ6UX15 382 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 BBS12Q6ZW61 710 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 TTC7BQ86TV6 843 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 CCDC13Q8IYE1 715 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 ARRDC2Q8TBH0 407 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 NETO1Q8TDF5 533 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.86■□□□□ 0.45
VPS52-214ENST00000463486 RBM41Q96IZ5 413 aaKnown RBP17.86■□□□□ 0.45
VPS52-214ENST00000463486 PDLIM2Q96JY6 352 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 EDEM2Q9BV94 578 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 ATP13A3Q9H7F0 1226 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 NT5MQ9NPB1 228 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 DMTF1Q9Y222 760 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 ATP8A1Q9Y2Q0 1164 aa17.86■□□□□ 0.45
VPS52-214ENST00000463486 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.86■□□□□ 0.45
VPS52-214ENST00000463486 A0A1B0GVT2 93 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 KCNK1O00180 336 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 SLC30A4O14863 429 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 FTCDO95954 541 aa17.85■□□□□ 0.45
VPS52-214ENST00000463486 PYGMP11217 842 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms