RNA–Protein interactions for RNA: ENST00000463184.1

VARS-221, Transcript of valyl-tRNA synthetase, humanhuman

TSL 2

Gene VARS, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-221ENST00000463184 TM7SF2O76062 418 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 ANXA6P08133 673 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 EEF1GP26641 437 aaKnown RBP20.05■□□□□ 0.8
VARS-221ENST00000463184 SDC4P31431 198 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 MLLT3P42568 568 aaPredicted RBP20.05■□□□□ 0.8
VARS-221ENST00000463184 ZNF165P49910 485 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 RAD51Q06609 339 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 CDO1Q16878 200 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 CCDC14Q49A88 953 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 PERM1Q5SV97 790 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 GDPD4Q6W3E5 623 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 VPS36Q86VN1 386 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 ZNF677Q86XU0 584 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 WDR36Q8NI36 951 aaKnown RBP20.05■□□□□ 0.8
VARS-221ENST00000463184 EPS8L1Q8TE68 723 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 VOPP1Q96AW1 172 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 TCEAL2Q9H3H9 227 aaPredicted RBP20.05■□□□□ 0.8
VARS-221ENST00000463184 FANCLQ9NW38 375 aa20.05■□□□□ 0.8
VARS-221ENST00000463184 ZSCAN5CA6NGD5 496 aaPredicted RBP20.04■□□□□ 0.8
VARS-221ENST00000463184 SMTNL1A8MU46 457 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 CDRT15L2A8MXV6 281 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 J3QKU1 62 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 PES1O00541 588 aaKnown RBP20.04■□□□□ 0.8
VARS-221ENST00000463184 KDELR3O43731 214 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 LRIG2O94898 1065 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 IGFALSP35858 605 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 C1orf61Q13536 156 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 NCAPHQ15003 741 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 C15orf59Q2T9L4 293 aaPredicted RBP20.04■□□□□ 0.8
VARS-221ENST00000463184 RAB6CQ53S08 254 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 FAXCQ5TGI0 409 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 CDKAL1Q5VV42 579 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 ESRP1Q6NXG1 681 aaKnown RBP20.04■□□□□ 0.8
VARS-221ENST00000463184 CRTC1Q6UUV9 634 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 MACC1Q6ZN28 852 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 STRADAQ7RTN6 431 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 SLC35F3Q8IY50 421 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 AOPEPQ8N6M6 819 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 CXorf40AQ8TE69 158 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 RXFP2Q8WXD0 754 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 TTC9Q92623 222 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 TBC1D31Q96DN5 1066 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 LRRC61Q9BV99 259 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 RAB6CQ9H0N0 254 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 CHD5Q8TDI0 1954 aa20.04■□□□□ 0.8
VARS-221ENST00000463184 COL27A1Q8IZC6 1860 aaPredicted RBP20.03■□□□□ 0.8
VARS-221ENST00000463184 FLNBO75369 2602 aaKnown RBP20.03■□□□□ 0.8
VARS-221ENST00000463184 RP1P56715 2156 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 F8VZ95 297 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 FAM72CH0Y354 149 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 K7ENP7 123 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 YY2O15391 372 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 MMP20O60882 483 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 PLEKP08567 350 aaPredicted RBP20.03■□□□□ 0.8
VARS-221ENST00000463184 MMP8P22894 467 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 EIF4A3P38919 411 aaKnown RBP20.03■□□□□ 0.8
VARS-221ENST00000463184 PTPN9P43378 593 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 BLKP51451 505 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 PPARDQ03181 441 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 SPIDRQ14159 915 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 HSP90AA4PQ58FG1 418 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 TCP11X2Q5H9J9 407 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 FAM72AQ5TYM5 149 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 FAM72DQ6L9T8 149 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 INO80CQ6PI98 192 aaPredicted RBP20.03■□□□□ 0.8
VARS-221ENST00000463184 FAM72BQ86X60 149 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 CASKIN2Q8WXE0 1202 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 GDAP1L1Q96MZ0 367 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 CCDC3Q9BQI4 270 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 TTYH3Q9C0H2 523 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 CLPBQ9H078 707 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 DKK3Q9UBP4 350 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 PNMA8BQ9ULN7 279 aaPredicted RBP20.03■□□□□ 0.8
VARS-221ENST00000463184 PADI4Q9UM07 663 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 ZNF462Q96JM2 2506 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 CFAP46Q8IYW2 2715 aa20.03■□□□□ 0.8
VARS-221ENST00000463184 C2CD4BA6NLJ0 364 aa20.02■□□□□ 0.8
VARS-221ENST00000463184 BUB1O43683 1085 aa20.02■□□□□ 0.8
VARS-221ENST00000463184 CYP1A1P04798 512 aaPredicted RBP20.02■□□□□ 0.8
VARS-221ENST00000463184 TSHRP16473 764 aa20.02■□□□□ 0.8
VARS-221ENST00000463184 INO80DQ53TQ3 878 aaPredicted RBP20.02■□□□□ 0.8
VARS-221ENST00000463184 ATXN7L2Q5T6C5 722 aaPredicted RBP20.02■□□□□ 0.8
VARS-221ENST00000463184 FOXR1Q6PIV2 292 aa20.02■□□□□ 0.8
VARS-221ENST00000463184 LEKR1Q6ZMV7 388 aa20.02■□□□□ 0.8
VARS-221ENST00000463184 CLEC14AQ86T13 490 aa20.02■□□□□ 0.8
VARS-221ENST00000463184 FSTL5Q8N475 847 aaPredicted RBP20.02■□□□□ 0.8
VARS-221ENST00000463184 TP53I13Q8NBR0 393 aaPredicted RBP20.02■□□□□ 0.8
VARS-221ENST00000463184 SCG3Q8WXD2 468 aaKnown RBP20.02■□□□□ 0.8
VARS-221ENST00000463184 CENPIQ92674 756 aaPredicted RBP20.02■□□□□ 0.8
VARS-221ENST00000463184 EPAS1Q99814 870 aa20.02■□□□□ 0.8
VARS-221ENST00000463184 MBNL1Q9NR56 388 aaKnown RBP20.02■□□□□ 0.8
VARS-221ENST00000463184 NOCTQ9UK39 431 aaKnown RBP20.02■□□□□ 0.8
VARS-221ENST00000463184 DOLKQ9UPQ8 538 aa20.02■□□□□ 0.8
VARS-221ENST00000463184 NEU3Q9UQ49 428 aa20.02■□□□□ 0.8
VARS-221ENST00000463184 MFHAS1Q9Y4C4 1052 aa20.02■□□□□ 0.8
VARS-221ENST00000463184 COL6A6A6NMZ7 2263 aa20.02■□□□□ 0.8
VARS-221ENST00000463184 SETXQ7Z333 2677 aaKnown RBP20.02■□□□□ 0.8
VARS-221ENST00000463184 ASH1LQ9NR48 2969 aaKnown RBP20.02■□□□□ 0.8
VARS-221ENST00000463184 CCDC187A0A096LP49 1063 aa20.01■□□□□ 0.79
VARS-221ENST00000463184 TMEM110-MUSTN1A8MSY1 372 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms