RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 RPS27LQ71UM5 84 aaKnown RBP17.09■□□□□ 0.33
ACTB-207ENST00000462494 BEND5Q7L4P6 421 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 SERINC5Q86VE9 423 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 SPDYE1Q8NFV5 336 aaPredicted RBP17.09■□□□□ 0.33
ACTB-207ENST00000462494 TMA16Q96EY4 203 aaKnown RBP17.09■□□□□ 0.33
ACTB-207ENST00000462494 NPAS2Q99743 824 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 WDR41Q9HAD4 459 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 MRM3Q9HC36 420 aaKnown RBP17.09■□□□□ 0.33
ACTB-207ENST00000462494 VCLP18206 1134 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 DNAJB1P25685 340 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 PLK1P53350 603 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 POU4F1Q01851 419 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 MGAT3Q09327 533 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 SLC39A12Q504Y0 691 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 MAP3K21Q5TCX8 1036 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 CCDC117Q8IWD4 279 aaPredicted RBP17.09■□□□□ 0.33
ACTB-207ENST00000462494 ICA1LQ8NDH6 482 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 PDCD6IPQ8WUM4 868 aaKnown RBP17.09■□□□□ 0.33
ACTB-207ENST00000462494 PPP1R2P1Q96PQ5 205 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 OLFM1Q99784 485 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 ZNF385DQ9H6B1 395 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 TBC1D13Q9NVG8 400 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 ABI2Q9NYB9 513 aaPredicted RBP17.09■□□□□ 0.33
ACTB-207ENST00000462494 CLIC5Q9NZA1 410 aa17.09■□□□□ 0.33
ACTB-207ENST00000462494 NYNRINQ9P2P1 1898 aaKnown RBP17.09■□□□□ 0.33
ACTB-207ENST00000462494 TRPM7Q96QT4 1865 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 BRCA2P51587 3418 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 TTC24A2A3L6 582 aaPredicted RBP17.08■□□□□ 0.33
ACTB-207ENST00000462494 TNFRSF10BO14763 440 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 NPHS1O60500 1241 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 KPNA6O60684 536 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 ATP5F1P24539 256 aaPredicted RBP17.08■□□□□ 0.33
ACTB-207ENST00000462494 HTR7P34969 479 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 ALDH1A3P47895 512 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 KPNA2P52292 529 aaKnown RBP17.08■□□□□ 0.33
ACTB-207ENST00000462494 YWHAHQ04917 246 aaPredicted RBP17.08■□□□□ 0.33
ACTB-207ENST00000462494 ZNF423Q2M1K9 1284 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 FAM83EQ2M2I3 478 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 PIGGQ5H8A4 983 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 ARTNQ5T4W7 220 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 PABPC5Q96DU9 382 aaKnown RBP17.08■□□□□ 0.33
ACTB-207ENST00000462494 KLHL5Q96PQ7 755 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 GCNAQ96QF7 691 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 EFCAB1Q9HAE3 211 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 IGSF5Q9NSI5 407 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 OSER1Q9NX31 292 aa17.08■□□□□ 0.33
ACTB-207ENST00000462494 A0A0U1RQF3 1178 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 CAPN8A6NHC0 703 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 TRPC5OSA6NMA1 111 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 SLC22A2O15244 555 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 ZNF623O75123 536 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 TCN1P20061 433 aaPredicted RBP17.08■□□□□ 0.32
ACTB-207ENST00000462494 CD86P42081 329 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 HUNKP57058 714 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 IRX1P78414 480 aaPredicted RBP17.08■□□□□ 0.32
ACTB-207ENST00000462494 PIK3R6Q5UE93 754 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 PIWIL4Q7Z3Z4 852 aaKnown RBP17.08■□□□□ 0.32
ACTB-207ENST00000462494 PTAR1Q7Z6K3 402 aaPredicted RBP17.08■□□□□ 0.32
ACTB-207ENST00000462494 PGAM4Q8N0Y7 254 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 PQLC1Q8N2U9 271 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 ZNF483Q8TF39 744 aaPredicted RBP17.08■□□□□ 0.32
ACTB-207ENST00000462494 PHF21BQ96EK2 531 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 TRAPPC9Q96Q05 1148 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 PSMD13Q9UNM6 376 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 DTNAQ9Y4J8 743 aa17.08■□□□□ 0.32
ACTB-207ENST00000462494 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.08■□□□□ 0.32
ACTB-207ENST00000462494 CCDC189A1A4V9 331 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 HEATR9A2RTY3 570 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 KCNU1A8MYU2 1149 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 J3KR12 359 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 CCL22O00626 93 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 FESP07332 822 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 CCDC166P0CW27 439 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 ARSAP15289 507 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 KCNA5P22460 613 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 DPP6P42658 865 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 RAB27AP51159 221 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 POLE2P56282 527 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 XIAPP98170 497 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 CEACAM7Q14002 265 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 LDB1Q86U70 411 aaPredicted RBP17.07■□□□□ 0.32
ACTB-207ENST00000462494 BHLHE22Q8NFJ8 381 aaPredicted RBP17.07■□□□□ 0.32
ACTB-207ENST00000462494 SERPINB11Q96P15 392 aa17.07■□□□□ 0.32
ACTB-207ENST00000462494 NOL6Q9H6R4 1146 aaKnown RBP17.07■□□□□ 0.32
ACTB-207ENST00000462494 PAPOLBQ9NRJ5 636 aaKnown RBP17.07■□□□□ 0.32
ACTB-207ENST00000462494 SPATS2LQ9NUQ6 558 aaKnown RBP17.07■□□□□ 0.32
ACTB-207ENST00000462494 TDRD15B5MCY1 1934 aaKnown RBP17.07■□□□□ 0.32
ACTB-207ENST00000462494 SDHDO14521 159 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 CASQ2O14958 399 aaPredicted RBP17.06■□□□□ 0.32
ACTB-207ENST00000462494 ADSLP30566 484 aaPredicted RBP17.06■□□□□ 0.32
ACTB-207ENST00000462494 SERPINH1P50454 418 aaKnown RBP17.06■□□□□ 0.32
ACTB-207ENST00000462494 MLLT6P55198 1093 aaPredicted RBP17.06■□□□□ 0.32
ACTB-207ENST00000462494 MS4A2Q01362 244 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 DDR2Q16832 855 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 AGAP9Q5VTM2 703 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 AFMIDQ63HM1 303 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 SLC30A9Q6PML9 568 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 KDELC1Q6UW63 502 aa17.06■□□□□ 0.32
ACTB-207ENST00000462494 C17orf99Q6UX52 265 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms