RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 TRHDEQ9UKU6 1024 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 FZD4Q9ULV1 537 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 PCDHGC4Q9Y5F7 938 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 MUC6Q6W4X9 2439 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 EML5Q05BV3 1969 aa11.92□□□□□ -0.5
CPNE1-221ENST00000462352 WDFY4Q6ZS81 3184 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 CFAP69A5D8W1 941 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 TRAFD1O14545 582 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-221ENST00000462352 SOCS5O75159 536 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 STK10O94804 968 aaKnown RBP11.91□□□□□ -0.5
CPNE1-221ENST00000462352 MMP2P08253 660 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 SERPINF2P08697 491 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 NFKB1P19838 968 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 BCKDHBP21953 392 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 CD6P30203 668 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 ACSL1P33121 698 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 CD86P42081 329 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 NEK3P51956 506 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 GDF10P55107 478 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 SKOR1P84550 965 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 TRAF2Q12933 501 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 SNX1Q13596 522 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 ANKRD20A2Q5SQ80 823 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 ANKRD20A1Q5TYW2 823 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 AGBL4Q5VU57 503 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 ANKRD20A3Q5VUR7 823 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 DRICH1Q6PGQ1 229 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-221ENST00000462352 ZC3H14Q6PJT7 736 aaKnown RBP11.91□□□□□ -0.5
CPNE1-221ENST00000462352 PRPF39Q86UA1 669 aaKnown RBP11.91□□□□□ -0.5
CPNE1-221ENST00000462352 CREG2Q8IUH2 290 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 FAM71DQ8N9W8 422 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 ATOH1Q92858 354 aaPredicted RBP11.91□□□□□ -0.5
CPNE1-221ENST00000462352 ECHDC3Q96DC8 303 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 IMP4Q96G21 291 aaKnown RBP11.91□□□□□ -0.5
CPNE1-221ENST00000462352 TOE1Q96GM8 510 aaKnown RBP11.91□□□□□ -0.5
CPNE1-221ENST00000462352 CAPZA3Q96KX2 299 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 SPATA13Q96N96 652 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 AP1M1Q9BXS5 423 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 BTBD1Q9H0C5 482 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 IRF2BPLQ9H1B7 796 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 SLC25A51Q9H1U9 297 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 SGK2Q9HBY8 427 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 HOMER3Q9NSC5 361 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 DKK3Q9UBP4 350 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 ZNF148Q9UQR1 794 aa11.91□□□□□ -0.5
CPNE1-221ENST00000462352 TSPAN11A1L157 253 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 C5orf60A6NFR6 353 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 SLC7A4O43246 635 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 MAP3K13O43283 966 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 HTRA2O43464 458 aaPredicted RBP11.9□□□□□ -0.5
CPNE1-221ENST00000462352 PLRG1O43660 514 aaKnown RBP11.9□□□□□ -0.5
CPNE1-221ENST00000462352 ITGAVP06756 1048 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 ADRB3P13945 408 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 STIP1P31948 543 aaKnown RBP11.9□□□□□ -0.5
CPNE1-221ENST00000462352 ADPRHP54922 357 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 TAS2R38P59533 333 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 CCDC15Q0P6D6 951 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 CFAP58Q5T655 872 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 ITPRIPL1Q6GPH6 555 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 FBXL19Q6PCT2 694 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 BRAT1Q6PJG6 821 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 SLC36A4Q6YBV0 504 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 CEP68Q76N32 757 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 C11orf74Q86VG3 221 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 ZSCAN30Q86W11 494 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 ZSWIM9Q86XI8 627 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 OR14C36Q8NHC7 312 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 SPATA22Q8NHS9 363 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 CCDC110Q8TBZ0 833 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 HCAR2Q8TDS4 363 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 PDCD6IPQ8WUM4 868 aaKnown RBP11.9□□□□□ -0.5
CPNE1-221ENST00000462352 RTP4Q96DX8 246 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 FCRL5Q96RD9 977 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 RBM15Q96T37 977 aaKnown RBP eCLIP11.9□□□□□ -0.5
CPNE1-221ENST00000462352 GPR174Q9BXC1 333 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 TDRD1Q9BXT4 1180 aaKnown RBP11.9□□□□□ -0.5
CPNE1-221ENST00000462352 RSPH14Q9UHP6 348 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 DRG1Q9Y295 367 aaKnown RBP11.9□□□□□ -0.5
CPNE1-221ENST00000462352 RAI2Q9Y5P3 530 aa11.9□□□□□ -0.5
CPNE1-221ENST00000462352 PLXND1Q9Y4D7 1925 aa11.9□□□□□ -0.51
CPNE1-221ENST00000462352 F5H423 210 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-221ENST00000462352 FZD6O60353 706 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 OPHN1O60890 802 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 NDUFS2O75306 463 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 GCATO75600 419 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 SEMA4FO95754 770 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 MT-CYBP00156 380 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-221ENST00000462352 TUBB4AP04350 444 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 TIMP2P16035 220 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 ABL2P42684 1182 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 KCNJ1P48048 391 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 RPL6Q02878 288 aaKnown RBP11.89□□□□□ -0.51
CPNE1-221ENST00000462352 SIM2Q14190 667 aaPredicted RBP11.89□□□□□ -0.51
CPNE1-221ENST00000462352 SLC14A2Q15849 920 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 CYP1B1Q16678 543 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 UGP2Q16851 508 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 PLK5Q496M5 336 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 LRRC73Q5JTD7 316 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 ARMC12Q5T9G4 340 aa11.89□□□□□ -0.51
CPNE1-221ENST00000462352 TTC7BQ86TV6 843 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms