RNA–Protein interactions for RNA: ENST00000461550.5

MRPL28-207, Transcript of mitochondrial ribosomal protein L28, humanhuman

TSL 5

Gene MRPL28, Length 1,478 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-207ENST00000461550 RGRP47804 291 aa17.66■□□□□ 0.42
MRPL28-207ENST00000461550 RXRGP48443 463 aa17.66■□□□□ 0.42
MRPL28-207ENST00000461550 ADKP55263 362 aaKnown RBP17.66■□□□□ 0.42
MRPL28-207ENST00000461550 RAD51Q06609 339 aa17.66■□□□□ 0.42
MRPL28-207ENST00000461550 AFMIDQ63HM1 303 aa17.66■□□□□ 0.42
MRPL28-207ENST00000461550 TTC7BQ86TV6 843 aa17.66■□□□□ 0.42
MRPL28-207ENST00000461550 PSTKQ8IV42 348 aaKnown RBP17.66■□□□□ 0.42
MRPL28-207ENST00000461550 OXR1Q8N573 874 aa17.66■□□□□ 0.42
MRPL28-207ENST00000461550 ETNK2Q9NVF9 386 aa17.66■□□□□ 0.42
MRPL28-207ENST00000461550 DONSONQ9NYP3 566 aa17.66■□□□□ 0.42
MRPL28-207ENST00000461550 DMXL2Q8TDJ6 3036 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 TSPAN6O43657 245 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 KRT37O76014 449 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 TPM1P09493 284 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 RARAP10276 462 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 AMPD1P23109 780 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 TBX2Q13207 712 aaPredicted RBP17.65■□□□□ 0.42
MRPL28-207ENST00000461550 DNAJC3Q13217 504 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 PIGHQ14442 188 aaPredicted RBP17.65■□□□□ 0.42
MRPL28-207ENST00000461550 DPYSL2Q16555 572 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 ZNF542PQ5EBM4 170 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 Q6ZSR6 202 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 KANSL1Q7Z3B3 1105 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 ABI3BPQ7Z7G0 1075 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 CPNE8Q86YQ8 564 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 TSEN2Q8NCE0 465 aaKnown RBP17.65■□□□□ 0.42
MRPL28-207ENST00000461550 RAB7BQ96AH8 199 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 CNDP2Q96KP4 475 aaKnown RBP17.65■□□□□ 0.42
MRPL28-207ENST00000461550 BMFQ96LC9 184 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 SP110Q9HB58 689 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 SHROOM3Q8TF72 1996 aa17.65■□□□□ 0.42
MRPL28-207ENST00000461550 A6NNZ2 444 aa17.64■□□□□ 0.41
MRPL28-207ENST00000461550 H3BRJ5 948 aa17.64■□□□□ 0.41
MRPL28-207ENST00000461550 AREL1O15033 823 aa17.64■□□□□ 0.41
MRPL28-207ENST00000461550 PALMO75781 387 aa17.64■□□□□ 0.41
MRPL28-207ENST00000461550 LDOC1O95751 146 aaPredicted RBP17.64■□□□□ 0.41
MRPL28-207ENST00000461550 TIMP2P16035 220 aa17.64■□□□□ 0.41
MRPL28-207ENST00000461550 SSR1P43307 286 aaKnown RBP17.64■□□□□ 0.41
MRPL28-207ENST00000461550 SGCGQ13326 291 aa17.64■□□□□ 0.41
MRPL28-207ENST00000461550 ACAP1Q15027 740 aa17.64■□□□□ 0.41
MRPL28-207ENST00000461550 KLF6Q99612 283 aaPredicted RBP17.64■□□□□ 0.41
MRPL28-207ENST00000461550 WRAP53Q9BUR4 548 aaKnown RBP17.64■□□□□ 0.41
MRPL28-207ENST00000461550 C1QTNF2Q9BXJ5 285 aa17.64■□□□□ 0.41
MRPL28-207ENST00000461550 PACSIN1Q9BY11 444 aa17.64■□□□□ 0.41
MRPL28-207ENST00000461550 UCKL1Q9NWZ5 548 aa17.64■□□□□ 0.41
MRPL28-207ENST00000461550 IP6K2Q9UHH9 426 aa17.64■□□□□ 0.41
MRPL28-207ENST00000461550 NENFQ9UMX5 172 aa17.64■□□□□ 0.41
MRPL28-207ENST00000461550 AKR1B15C9JRZ8 316 aaPredicted RBP17.63■□□□□ 0.41
MRPL28-207ENST00000461550 ENC1O14682 589 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 BUB1BO60566 1050 aaPredicted RBP17.63■□□□□ 0.41
MRPL28-207ENST00000461550 MMP20O60882 483 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 DKK1O94907 266 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 GJC1P36383 396 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 ARL4AP40617 200 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 HCAR3P49019 387 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 SEMG2Q02383 582 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 SLC25A11Q02978 314 aaKnown RBP17.63■□□□□ 0.41
MRPL28-207ENST00000461550 BOLA3Q53S33 107 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 DHRS13Q6UX07 377 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 POLNQ7Z5Q5 900 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 CAMK1DQ8IU85 385 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 NIPA2Q8N8Q9 360 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 OR8K1Q8NGG5 319 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 CSPG4P5Q96PW8 444 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 CINPQ9BW66 212 aaPredicted RBP17.63■□□□□ 0.41
MRPL28-207ENST00000461550 CPEB1Q9BZB8 566 aaKnown RBP17.63■□□□□ 0.41
MRPL28-207ENST00000461550 PCDH18Q9HCL0 1135 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 IPO11Q9UI26 975 aaKnown RBP17.63■□□□□ 0.41
MRPL28-207ENST00000461550 FAM149AA5PLN7 773 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 MUSKO15146 869 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 MFAP3LO75121 409 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 PRKCGP05129 697 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 XPAP23025 273 aaPredicted RBP17.63■□□□□ 0.41
MRPL28-207ENST00000461550 HNRNPH3P31942 346 aaKnown RBP17.63■□□□□ 0.41
MRPL28-207ENST00000461550 CLDN6P56747 220 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 TPRG1LQ5T0D9 272 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 KYAT3Q6YP21 454 aaKnown RBP17.63■□□□□ 0.41
MRPL28-207ENST00000461550 ZSWIM9Q86XI8 627 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 SLC25A45Q8N413 288 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 SPC24Q8NBT2 197 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 ZNF564Q8TBZ8 553 aaPredicted RBP17.63■□□□□ 0.41
MRPL28-207ENST00000461550 CXorf40AQ8TE69 158 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 SUV39H2Q9H5I1 410 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 KLHL11Q9NVR0 708 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 DNAJC28Q9NX36 388 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 DKK3Q9UBP4 350 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 COQ6Q9Y2Z9 468 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 HS3ST3A1Q9Y663 406 aa17.63■□□□□ 0.41
MRPL28-207ENST00000461550 CFAP47Q6ZTR5 3102 aa17.62■□□□□ 0.41
MRPL28-207ENST00000461550 ANKRD11Q6UB99 2663 aaPredicted RBP17.62■□□□□ 0.41
MRPL28-207ENST00000461550 TTC24A2A3L6 582 aaPredicted RBP17.62■□□□□ 0.41
MRPL28-207ENST00000461550 FAM221BA6H8Z2 402 aa17.62■□□□□ 0.41
MRPL28-207ENST00000461550 MYO1FO00160 1098 aa17.62■□□□□ 0.41
MRPL28-207ENST00000461550 FPGTO14772 594 aa17.62■□□□□ 0.41
MRPL28-207ENST00000461550 FFAR2O15552 330 aa17.62■□□□□ 0.41
MRPL28-207ENST00000461550 DGKAP23743 735 aa17.62■□□□□ 0.41
MRPL28-207ENST00000461550 ZNF135P52742 658 aaPredicted RBP17.62■□□□□ 0.41
MRPL28-207ENST00000461550 IL10RBQ08334 325 aa17.62■□□□□ 0.41
MRPL28-207ENST00000461550 MMRN1Q13201 1228 aa17.62■□□□□ 0.41
MRPL28-207ENST00000461550 FZD2Q14332 565 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms