RNA–Protein interactions for RNA: ENST00000459909.1

TMEM50B-205, Transcript of transmembrane protein 50B, humanhuman

TSL 2

Gene TMEM50B, Length 618 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-205ENST00000459909 PDCLQ13371 301 aa16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 C4orf17Q53FE4 359 aa16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 SYPL2Q5VXT5 272 aa16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 ZNF571Q7Z3V5 609 aaPredicted RBP16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 B3GNT8Q7Z7M8 397 aa16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 VPS36Q86VN1 386 aa16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 OR2A12Q8NGT7 310 aa16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 CPA5Q8WXQ8 436 aa16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 PPP1R16AQ96I34 528 aa16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 ADNPQ9H2P0 1102 aa16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 SYNCQ9H7C4 482 aa16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 PADI4Q9UM07 663 aa16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 HS3ST2Q9Y278 367 aa16.9■□□□□ 0.3
TMEM50B-205ENST00000459909 LMO7DNF2Z398 122 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 FPGTO14772 594 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 RAD51BO15315 384 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 SRCP12931 536 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 HNRNPH3P31942 346 aaKnown RBP16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 NOMO3P69849 1222 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 EIF2B5Q13144 721 aaKnown RBP16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 FGL2Q14314 439 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 CLCA4Q14CN2 919 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 HGSNATQ68CP4 663 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 ESRP1Q6NXG1 681 aaKnown RBP16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 ZSCAN30Q86W11 494 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 WDTC1Q8N5D0 677 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 TC2NQ8N9U0 490 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 MSANTD4Q8NCY6 345 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 OR52K2Q8NGK3 314 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 ZNF564Q8TBZ8 553 aaPredicted RBP16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 STK32AQ8WU08 396 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 FEM1CQ96JP0 617 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 PPP1R13BQ96KQ4 1090 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 TBATAQ96M53 351 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 LENG8Q96PV6 779 aaPredicted RBP16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 PCDHB18PQ96TA0 734 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 EPN3Q9H201 632 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 IGSF5Q9NSI5 407 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 APOBEC3BQ9UH17 382 aaKnown RBP16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 MAN2B2Q9Y2E5 1009 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 OR51B4Q9Y5P0 310 aa16.89■□□□□ 0.29
TMEM50B-205ENST00000459909 E5RJQ4 531 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 SPINT1O43278 529 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 GCATO75600 419 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 TRUB2O95900 331 aaKnown RBP16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 IGLV3-25P01717 112 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 CYP1A1P04798 512 aaPredicted RBP16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 ANXA6P08133 673 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 PLEKP08567 350 aaPredicted RBP16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 JMJD7P0C870 316 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 HGFP14210 728 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 CDH5P33151 784 aaPredicted RBP16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 SNX16P57768 344 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 FOXK1P85037 733 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 CLEC16AQ2KHT3 1053 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 PRRT3Q5FWE3 981 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 TPRG1LQ5T0D9 272 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 FBXL22Q6P050 247 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 ATP11CQ8NB49 1132 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 SLC30A5Q8TAD4 765 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 RPRD1AQ96P16 312 aaPredicted RBP16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 PSMG3-AS1Q96PY0 264 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 GFM1Q96RP9 751 aaKnown RBP16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 CPXM1Q96SM3 734 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 SLC4A5Q9BY07 1137 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 DEF6Q9H4E7 631 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 PCDHB11Q9Y5F2 797 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 UNC79Q9P2D8 2635 aa16.88■□□□□ 0.29
TMEM50B-205ENST00000459909 KIF26BQ2KJY2 2108 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 LRRK2Q5S007 2527 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 RELNP78509 3460 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 TMCO5BA8MYB1 307 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 D6RAR5 112 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 RNF103O00237 685 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 MT-CO1P00395 513 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 SLC2A3P11169 496 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 CCKBRP32239 447 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 EIF4A3P38919 411 aaKnown RBP16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 NSFP46459 744 aaKnown RBP16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 RPL34P49207 117 aaKnown RBP16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 NEK3P51956 506 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 CYP4F2P78329 520 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 KRT83P78385 493 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 CENPCQ03188 943 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 EIF4EBP2Q13542 120 aaPredicted RBP16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 PTK2BQ14289 1009 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 PTPN20Q4JDL3 420 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 ARSIQ5FYB1 569 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 WDR59Q6PJI9 974 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 VASH2Q86V25 355 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 PTRH1Q86Y79 214 aaKnown RBP16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 RBFAQ8N0V3 343 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 FAM26EQ8N5C1 309 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 HTR3CQ8WXA8 447 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 TMEM74Q96NL1 305 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 KLF6Q99612 283 aaPredicted RBP16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 SYT11Q9BT88 431 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 FOXP3Q9BZS1 431 aa16.87■□□□□ 0.29
TMEM50B-205ENST00000459909 PISDQ9UG56 409 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms