RNA–Protein interactions for RNA: ENST00000457226.2

SMARCA2-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5

Gene SMARCA2, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-216ENST00000457226 PLEKHA7Q6IQ23 1121 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 ERAP2Q6P179 960 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 BRAT1Q6PJG6 821 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 C19orf48Q6RUI8 117 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 LEKR1Q6ZMV7 388 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 PDZD3Q86UT5 571 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 LSMEM2Q8N112 164 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 ZNF548Q8NEK5 533 aaPredicted RBP13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 TPCN2Q8NHX9 752 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 CENPTQ96BT3 561 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 APOLD1Q96LR9 279 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 DEPDC7Q96QD5 511 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 TUBGCP5Q96RT8 1024 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 IL12RB2Q99665 862 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 SYT11Q9BT88 431 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 MRPL47Q9HD33 250 aaKnown RBP13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 AIPL1Q9NZN9 384 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 SPASTQ9UBP0 616 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 SALL4Q9UJQ4 1053 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 RALYQ9UKM9 306 aaKnown RBP13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 AP4E1Q9UPM8 1137 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 PTPRBP23467 1997 aa13.59□□□□□ -0.23
SMARCA2-216ENST00000457226 LRRC53A6NM62 1247 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 K7ESM1 405 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 EEF2KO00418 725 aaKnown RBP13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 RAD51BO15315 384 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 PRPSAP2O60256 369 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 MT-CO3P00414 261 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 JUNDP17535 347 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 CSNK1DP48730 415 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 PEX5P50542 639 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 TPM4P67936 248 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 RFTN1Q14699 578 aaPredicted RBP13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 COL28A1Q2UY09 1125 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 TMCO4Q5TGY1 634 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 LZTR1Q8N653 840 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 ATL2Q8NHH9 583 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 WDR48Q8TAF3 677 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 HNRNPLLQ8WVV9 542 aaKnown RBP13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 MAGEB5Q9BZ81 275 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 SLC13A1Q9BZW2 595 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 LRRC19Q9H756 370 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 DOCK4Q8N1I0 1966 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 CABIN1Q9Y6J0 2220 aa13.58□□□□□ -0.24
SMARCA2-216ENST00000457226 TSPAN11A1L157 253 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 CFAP69A5D8W1 941 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 TMEM191CA6NGB0 347 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 OPA1O60313 960 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 PRAMEF11O60813 436 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 GIMD1P0DJR0 217 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 HTR1BP28222 390 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 SERPINA4P29622 427 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 PRKCIP41743 596 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 ABCG1P45844 678 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 HCAR3P49019 387 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 ZNF165P49910 485 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 POLR2LP62875 67 aaKnown RBP13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 SEMG2Q02383 582 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 KLHL30Q0D2K2 578 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 ACAP1Q15027 740 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 LRRC14Q15048 493 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 UGP2Q16851 508 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 TMEM52BQ4KMG9 183 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 ZNF542PQ5EBM4 170 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 MACC1Q6ZN28 852 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 RFX8Q6ZV50 586 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 VPS36Q86VN1 386 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 SDR16C5Q8N3Y7 309 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 SNIP1Q8TAD8 396 aaKnown RBP13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 SCG3Q8WXD2 468 aaKnown RBP13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 FGF11Q92914 225 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 SUV39H2Q9H5I1 410 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 DHX35Q9H5Z1 703 aaKnown RBP13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 ATP13A3Q9H7F0 1226 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 PDFQ9HBH1 243 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 LHX3Q9UBR4 397 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 APOBEC3BQ9UH17 382 aaKnown RBP13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 ITM2BQ9Y287 266 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 BZW2Q9Y6E2 419 aaKnown RBP13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 TP53BP1Q12888 1972 aaPredicted RBP13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 KNL1Q8NG31 2342 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 NBEAQ8NFP9 2946 aa13.57□□□□□ -0.24
SMARCA2-216ENST00000457226 PLXNB3Q9ULL4 1909 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 TMCO5BA8MYB1 307 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 LMO7DNF2Z398 122 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 SPINT1O43278 529 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 MMP20O60882 483 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 PALMO75781 387 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 FTLP02792 175 aaPredicted RBP13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 TIMP2P16035 220 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 EIF2S3P41091 472 aaKnown RBP13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 RENBPP51606 427 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 NSUN2Q08J23 767 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 AGERQ15109 404 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 CYTH1Q15438 398 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 NR0B2Q15466 257 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 KLHL40Q2TBA0 621 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 FIGNQ5HY92 759 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 CDCP2Q5VXM1 449 aa13.56□□□□□ -0.24
SMARCA2-216ENST00000457226 FSTL5Q8N475 847 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms