RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ZNF284Q2VY69 593 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 ZFYVE27Q5T4F4 411 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 KIAA1161Q6NSJ0 714 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 ZNF662Q6ZS27 426 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 NT5DC3Q86UY8 548 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 HORMAD1Q86X24 394 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 ZSWIM9Q86XI8 627 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 LRRC8AQ8IWT6 810 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 TMEM145Q8NBT3 493 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 RNF25Q96BH1 459 aaPredicted RBP14.33□□□□□ -0.12
HDAC4-205ENST00000454542 RMDN1Q96DB5 314 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 RBM41Q96IZ5 413 aaKnown RBP14.33□□□□□ -0.12
HDAC4-205ENST00000454542 SLC6A18Q96N87 628 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 NUDCD1Q96RS6 583 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 ZDHHC5Q9C0B5 715 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 MIR1-1HGQ9H1L0 117 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 PCDHA3Q9Y5H8 950 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 CAPN6Q9Y6Q1 641 aa14.33□□□□□ -0.12
HDAC4-205ENST00000454542 TMEM131Q92545 1883 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TBC1D3DA0A087WVF3 549 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TBC1D3IA0A087WXS9 549 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TBC1D3EA0A087X179 549 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TBC1D3KA0A087X1G2 549 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-205ENST00000454542 CCDC66A2RUB6 948 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TBC1D3FA6NER0 549 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TBC1D3LB9A6J9 549 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TM4SF5O14894 197 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 MATN3O15232 486 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 HTRA2O43464 458 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-205ENST00000454542 RNGTTO60942 597 aaKnown RBP14.32□□□□□ -0.12
HDAC4-205ENST00000454542 SOCS5O75159 536 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TBC1D3HP0C7X1 549 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 PEX5P50542 639 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 ADCY2Q08462 1091 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 RSPO4Q2I0M5 234 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-205ENST00000454542 SETMARQ53H47 684 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TFDP3Q5H9I0 405 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 STPG1Q5TH74 334 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 MARC1Q5VT66 337 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TBC1D3GQ6DHY5 549 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TBC1D3CQ6IPX1 549 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 NAPEPLDQ6IQ20 393 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 BRAT1Q6PJG6 821 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 RFX6Q8HWS3 928 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TBC1D3Q8IZP1 549 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.32□□□□□ -0.12
HDAC4-205ENST00000454542 SUV39H2Q9H5I1 410 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 ATP13A3Q9H7F0 1226 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 TMEM9BQ9NQ34 198 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 FSCN3Q9NQT6 498 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 GGT7Q9UJ14 662 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 CDV3Q9UKY7 258 aaKnown RBP14.32□□□□□ -0.12
HDAC4-205ENST00000454542 ITM2BQ9Y287 266 aa14.32□□□□□ -0.12
HDAC4-205ENST00000454542 LRRK1Q38SD2 2015 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 DOCK9Q9BZ29 2069 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 A0A1W2PQU0 124 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 UPK3BL1B0FP48 263 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 UPK3BL2E5RIL1 263 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 WNT9AO14904 365 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 TSPAN6O43657 245 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 ZRANB2O95218 330 aaKnown RBP eCLIP14.31□□□□□ -0.12
HDAC4-205ENST00000454542 WNT1P04628 370 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 SYPP08247 313 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 TNNT1P13805 278 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 TIMP2P16035 220 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 SDHBP21912 280 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 TGM2P21980 687 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 SERPINA4P29622 427 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 COPS2P61201 443 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 IFI35P80217 286 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-205ENST00000454542 TFDP2Q14188 446 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 FGL2Q14314 439 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 SEL1L3Q68CR1 1132 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 FBXL19Q6PCT2 694 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 NPNTQ6UXI9 565 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 PRPF39Q86UA1 669 aaKnown RBP14.31□□□□□ -0.12
HDAC4-205ENST00000454542 CAMK1DQ8IU85 385 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 CCDC13Q8IYE1 715 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 RCOR2Q8IZ40 523 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 BBS5Q8N3I7 341 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 RNF10Q8N5U6 811 aaKnown RBP14.31□□□□□ -0.12
HDAC4-205ENST00000454542 KIAA1524Q8TCG1 905 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 NSMCE1Q8WV22 266 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 ASB12Q8WXK4 309 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 ZNF830Q96NB3 372 aaPredicted RBP14.31□□□□□ -0.12
HDAC4-205ENST00000454542 IL12RB2Q99665 862 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 RTKNQ9BST9 563 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 TSGA10Q9BZW7 698 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 DNAAF2Q9NVR5 837 aaKnown RBP14.31□□□□□ -0.12
HDAC4-205ENST00000454542 EFR3BQ9Y2G0 817 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.31□□□□□ -0.12
HDAC4-205ENST00000454542 TRPM6Q9BX84 2022 aa14.31□□□□□ -0.12
HDAC4-205ENST00000454542 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-205ENST00000454542 MACROD2A1Z1Q3 448 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 PPP1R12AO14974 1030 aaPredicted RBP14.3□□□□□ -0.12
HDAC4-205ENST00000454542 VILLO15195 856 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 HLA-DQB2P05538 268 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 KRT10P13645 584 aa14.3□□□□□ -0.12
HDAC4-205ENST00000454542 PECAM1P16284 738 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms