RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 ZNF621Q6ZSS3 439 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 ZNF438Q7Z4V0 828 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 LRRC49Q8IUZ0 686 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 DPP10Q8N608 796 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 POLR1EQ9GZS1 481 aaKnown RBP12.14□□□□□ -0.47
SEC16A-207ENST00000453963 GRHL1Q9NZI5 618 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 NUDT5Q9UKK9 219 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 IFRD1O00458 451 aaPredicted RBP12.14□□□□□ -0.47
SEC16A-207ENST00000453963 ABCB1P08183 1280 aaPredicted RBP12.14□□□□□ -0.47
SEC16A-207ENST00000453963 TPSB2P20231 275 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 TPSAB1Q15661 275 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 MAPKAPK3Q16644 382 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 ZNF544Q6NX49 715 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 EPHX4Q8IUS5 362 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 GALNT15Q8N3T1 639 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 MAB21L3Q8N8X9 362 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 ST13P5Q8NFI4 369 aaPredicted RBP12.14□□□□□ -0.47
SEC16A-207ENST00000453963 MCOLN3Q8TDD5 553 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 MYDGFQ969H8 173 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 PPP3R2Q96LZ3 170 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 ELOVL4Q9GZR5 314 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 EPB41L4BQ9H329 900 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 ZMYM5Q9UJ78 669 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 TBC1D30Q9Y2I9 924 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 GSTK1Q9Y2Q3 226 aa12.14□□□□□ -0.47
SEC16A-207ENST00000453963 TRIM43BA6NCK2 446 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 NRP2O60462 931 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 TSPAN19P0C672 248 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 TRAP1Q12931 704 aaKnown RBP12.13□□□□□ -0.47
SEC16A-207ENST00000453963 MZT2BQ6NZ67 158 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 APTXQ7Z2E3 356 aaKnown RBP12.13□□□□□ -0.47
SEC16A-207ENST00000453963 LEMD2Q8NC56 503 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 CPT1BQ92523 772 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 PANX3Q96QZ0 392 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 FGFBP2Q9BYJ0 223 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 LHX5Q9H2C1 402 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 EPB41L1Q9H4G0 881 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 RPS6KB2Q9UBS0 482 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 ZNF112Q9UJU3 913 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 MAPRE3Q9UPY8 281 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 NFASCO94856 1347 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 IDO1P14902 403 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 PBLDP30039 288 aaPredicted RBP12.13□□□□□ -0.47
SEC16A-207ENST00000453963 GALK1P51570 392 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 CDC42P60953 191 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 STXBP5Q5T5C0 1151 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 INTS11Q5TA45 600 aaKnown RBP12.13□□□□□ -0.47
SEC16A-207ENST00000453963 MFSD4BQ5TF39 518 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 ARHGAP36Q6ZRI8 547 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 PROSER1Q86XN7 944 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 ZNF540Q8NDQ6 660 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 OR5B17Q8NGF7 314 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 TMEM159Q96B96 161 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 CLPTM1LQ96KA5 538 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 OMDQ99983 421 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 CHID1Q9BWS9 393 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 FAM126AQ9BYI3 521 aaPredicted RBP12.13□□□□□ -0.47
SEC16A-207ENST00000453963 ATP13A1Q9HD20 1204 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 PTTG2Q9NZH5 202 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 FBXO5Q9UKT4 447 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 FADS3Q9Y5Q0 445 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 TRPV2Q9Y5S1 764 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 NID2Q14112 1375 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 H0YC42 278 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 SIN3BO75182 1162 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 STAU1O95793 577 aaKnown RBP12.13□□□□□ -0.47
SEC16A-207ENST00000453963 ADSLP30566 484 aaPredicted RBP12.13□□□□□ -0.47
SEC16A-207ENST00000453963 USP46P62068 366 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 BTG3Q14201 252 aaPredicted RBP12.13□□□□□ -0.47
SEC16A-207ENST00000453963 STARD3Q14849 445 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 ZC3H12AQ5D1E8 599 aaKnown RBP12.13□□□□□ -0.47
SEC16A-207ENST00000453963 FAM171A1Q5VUB5 890 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 PGAM4Q8N0Y7 254 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 TMEM86AQ8N2M4 240 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 PSMA8Q8TAA3 256 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 ZCCHC2Q9C0B9 1178 aaKnown RBP12.13□□□□□ -0.47
SEC16A-207ENST00000453963 RHOJQ9H4E5 214 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 FAM53CQ9NYF3 392 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 EURLQ9NYK6 297 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 TRPC4Q9UBN4 977 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 VAV3Q9UKW4 847 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 TRIM17Q9Y577 477 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 H3BMM5 538 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 AZIN1O14977 448 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 IDH3BO43837 385 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 COL6A2P12110 1019 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 IDH2P48735 452 aaKnown RBP12.13□□□□□ -0.47
SEC16A-207ENST00000453963 ACSM2AQ08AH3 577 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 CRY2Q49AN0 593 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 ACSM2BQ68CK6 577 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 ZNF549Q6P9A3 640 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 NANOGNBQ7Z5D8 188 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 DEPDC4Q8N2C3 294 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 FETUBQ9UGM5 382 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 PCDHAC2Q9Y5I4 1007 aa12.13□□□□□ -0.47
SEC16A-207ENST00000453963 RECQL4O94761 1208 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 HIRAP54198 1017 aaPredicted RBP12.12□□□□□ -0.47
SEC16A-207ENST00000453963 CYP1B1Q16678 543 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 KLHL12Q53G59 568 aa12.12□□□□□ -0.47
SEC16A-207ENST00000453963 RNASEH2BQ5TBB1 312 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms