RNA–Protein interactions for RNA: ENST00000453046.5

SQSTM1-204, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-204ENST00000453046 GEMIN4P57678 1058 aaKnown RBP18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 OVGP1Q12889 678 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 EFHC2Q5JST6 749 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 NLRP14Q86W24 1093 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 RYBPQ8N488 228 aaPredicted RBP18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 UBL4BQ8N7F7 174 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 NTAN1Q96AB6 310 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 HDAC8Q9BY41 377 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 MAGEB5Q9BZ81 275 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 TM6SF2Q9BZW4 377 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 MAGEH1Q9H213 219 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 ERVMER34-1Q9H9K5 563 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 TOR4AQ9NXH8 423 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 DOCK4Q8N1I0 1966 aa18.3■□□□□ 0.52
SQSTM1-204ENST00000453046 CCDC66A2RUB6 948 aa18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 ZNF821O75541 412 aaPredicted RBP18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 LDOC1O95751 146 aaPredicted RBP18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 EPHA8P29322 1005 aaPredicted RBP18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 CTNNA1P35221 906 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 CCNHP51946 323 aaPredicted RBP18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 NEK3P51956 506 aa18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 POLD3Q15054 466 aaPredicted RBP18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 FBXL19Q6PCT2 694 aa18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 HORMAD1Q86X24 394 aa18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 SAP25Q8TEE9 199 aa18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 ARHGEF2Q92974 986 aaKnown RBP18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 KLHDC7BQ96G42 594 aa18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 MYOCQ99972 504 aa18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 ZDHHC6Q9H6R6 413 aa18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 HECAQ9UBI9 543 aaPredicted RBP18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 CA5BQ9Y2D0 317 aa18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 ACTL7AQ9Y615 435 aa18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 SAR1BQ9Y6B6 198 aa18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 WASF2Q9Y6W5 498 aa18.29■□□□□ 0.52
SQSTM1-204ENST00000453046 SPEGQ15772 3267 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 CXorf51AA0A1B0GTR3 108 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 RNF103O00237 685 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 CES2O00748 559 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 EPHB2P29323 1055 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 AKT2P31751 481 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 PCK1P35558 622 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 BNIP3Q12983 259 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 SHBQ15464 509 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 LRRC38Q5VT99 294 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 CCNI2Q6ZMN8 369 aaPredicted RBP18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 SPATS2Q86XZ4 545 aaKnown RBP18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 PYROXD2Q8N2H3 581 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 GALNT15Q8N3T1 639 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 EID2Q8N6I1 236 aa18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 CNDP2Q96KP4 475 aaKnown RBP18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 PACSIN2Q9UNF0 486 aaPredicted RBP18.28■□□□□ 0.52
SQSTM1-204ENST00000453046 DDX3YO15523 660 aaKnown RBP18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 CREB3O43889 395 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 LRCH4O75427 683 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 RNF8O76064 485 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 URI1O94763 535 aaPredicted RBP18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 THEGLP0DJG4 465 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 ADRB3P13945 408 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 HNRNPA2B1P22626 353 aaKnown RBP18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 ITGB7P26010 798 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 L1CAMP32004 1257 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 RXRGP48443 463 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 SNRPD1P62314 119 aaKnown RBP18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 SCAPQ12770 1279 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 LEKR1Q6ZMV7 388 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 TMPRSS7Q7RTY8 843 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 POLNQ7Z5Q5 900 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 RHOT1Q8IXI2 618 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 ISG20Q96AZ6 181 aaKnown RBP18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 OSBPL9Q96SU4 736 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 EPAS1Q99814 870 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 CARD9Q9H257 536 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 L2HGDHQ9H9P8 463 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 FZD3Q9NPG1 666 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 CDC23Q9UJX2 597 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 NEU3Q9UQ49 428 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 PCDHA3Q9Y5H8 950 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 MRFAP1Q9Y605 127 aa18.27■□□□□ 0.52
SQSTM1-204ENST00000453046 ZSCAN5CA6NGD5 496 aaPredicted RBP18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 KRIT1O00522 736 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 DKK1O94907 266 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 CD160O95971 181 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 HADHQ16836 314 aaKnown RBP18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 ZNF284Q2VY69 593 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 SEL1L3Q68CR1 1132 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 CPNE8Q86YQ8 564 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 OR2AP1Q8NGE2 309 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 OR6K2Q8NGY2 324 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 FEM1CQ96JP0 617 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 PBKQ96KB5 322 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 CALN1Q9BXU9 219 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 CATSPERBQ9H7T0 1116 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 FZD10Q9ULW2 581 aa18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 ZFR2Q9UPR6 939 aaKnown RBP18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 TP53BP1Q12888 1972 aaPredicted RBP18.26■□□□□ 0.51
SQSTM1-204ENST00000453046 SRRM3A6NNA2 597 aaPredicted RBP18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 NEMP1O14524 444 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 KDELR3O43731 214 aa18.25■□□□□ 0.51
SQSTM1-204ENST00000453046 GSRP00390 522 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms