RNA–Protein interactions for RNA: ENST00000452372.1

COL9A3-202, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 5

Gene COL9A3, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-202ENST00000452372 NEK3P51956 506 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 GRM3Q14832 879 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 ST3GAL2Q16842 350 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 TBC1D3GQ6DHY5 549 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 TBC1D3CQ6IPX1 549 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 SPOCD1Q6ZMY3 1216 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 RABEPKQ7Z6M1 372 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 SRLQ86TD4 932 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 RFX6Q8HWS3 928 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 TBC1D3Q8IZP1 549 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-202ENST00000452372 SYCE1Q8N0S2 351 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 BBS5Q8N3I7 341 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 OR2I1PQ8NGU4 316 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 FATE1Q969F0 183 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 RBM41Q96IZ5 413 aaKnown RBP20.19■□□□□ 0.82
COL9A3-202ENST00000452372 KLHL32Q96NJ5 620 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 TSGA10Q9BZW7 698 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 SUSD2Q9UGT4 822 aa20.19■□□□□ 0.82
COL9A3-202ENST00000452372 EIF2B4Q9UI10 523 aaKnown RBP20.19■□□□□ 0.82
COL9A3-202ENST00000452372 TPX2Q9ULW0 747 aaKnown RBP20.19■□□□□ 0.82
COL9A3-202ENST00000452372 CABIN1Q9Y6J0 2220 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 CCDC66A2RUB6 948 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 C16orf96A6NNT2 1141 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 UPK3BL1B0FP48 263 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 UPK3BL2E5RIL1 263 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 MUSKO15146 869 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 MATN3O15232 486 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 KRT86O43790 486 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 ADRB3P13945 408 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 GNSP15586 552 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 CTNNA2P26232 953 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 HSPA9P38646 679 aaKnown RBP20.18■□□□□ 0.82
COL9A3-202ENST00000452372 PEX5P50542 639 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 HNRNPDQ14103 355 aaKnown RBP20.18■□□□□ 0.82
COL9A3-202ENST00000452372 TFDP2Q14188 446 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 ZNF235Q14590 738 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 TFDP3Q5H9I0 405 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 MARC1Q5VT66 337 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 TIGD7Q6NT04 549 aaPredicted RBP20.18■□□□□ 0.82
COL9A3-202ENST00000452372 NEK5Q6P3R8 708 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 FBXL19Q6PCT2 694 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 PARS2Q7L3T8 475 aaKnown RBP20.18■□□□□ 0.82
COL9A3-202ENST00000452372 NT5DC3Q86UY8 548 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 C1orf216Q8TAB5 229 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 HCAR2Q8TDS4 363 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 ZNF830Q96NB3 372 aaPredicted RBP20.18■□□□□ 0.82
COL9A3-202ENST00000452372 PREBQ9HCU5 417 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 AMFRQ9UKV5 643 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 HEY1Q9Y5J3 304 aa20.18■□□□□ 0.82
COL9A3-202ENST00000452372 ZZEF1O43149 2961 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 ARHGAP33O14559 1287 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 CCDC175P0C221 793 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 KRT10P13645 584 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 CD27P26842 260 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 MMP13P45452 471 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 ZNF662Q6ZS27 426 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 PEX26Q7Z412 305 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 TEX26Q8N6G2 289 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 SNX19Q92543 992 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 MAML1Q92585 1016 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 ANP32BQ92688 251 aaKnown RBP20.17■□□□□ 0.82
COL9A3-202ENST00000452372 RAB7BQ96AH8 199 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 HDAC11Q96DB2 347 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 ZNF641Q96N77 438 aaPredicted RBP20.17■□□□□ 0.82
COL9A3-202ENST00000452372 TUBGCP5Q96RT8 1024 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 ORAI3Q9BRQ5 295 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 MIR1-1HGQ9H1L0 117 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 SUV39H2Q9H5I1 410 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 DKK3Q9UBP4 350 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 DOCK9Q9BZ29 2069 aa20.17■□□□□ 0.82
COL9A3-202ENST00000452372 ZFHX4Q86UP3 3567 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 hCG_1818297A0A087WSY0 165 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 A0A1B0GTW7 788 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 LATO43561 262 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 AP1G1O43747 822 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 CST8O60676 142 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 GJB3O75712 270 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 CD59P13987 128 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 CR2P20023 1033 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 SPINK2P20155 84 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 NR2C2P49116 596 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 SCNN1BP51168 640 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 RWDD2BP57060 319 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 COPS2P61201 443 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 AP1S1P61966 158 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 DYNLT1P63172 113 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 PDK1Q15118 436 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 PPP2R5EQ16537 467 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 TRIM69Q86WT6 500 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 CCDC50Q8IVM0 306 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 PGBD5Q8N414 524 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 CCNYQ8ND76 341 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 MGME1Q9BQP7 344 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 GTPBP2Q9BX10 602 aaKnown RBP20.16■□□□□ 0.82
COL9A3-202ENST00000452372 ATP13A3Q9H7F0 1226 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 EBF2Q9HAK2 575 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 GUCA1BQ9UMX6 200 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 FADS3Q9Y5Q0 445 aa20.16■□□□□ 0.82
COL9A3-202ENST00000452372 ANKRD36A6QL64 1941 aa20.15■□□□□ 0.82
COL9A3-202ENST00000452372 SPEGQ15772 3267 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms