RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 PACSIN1Q9BY11 444 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 PDFQ9HBH1 243 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 DNAJC28Q9NX36 388 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 CTTNBP2NLQ9P2B4 639 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 ZMIZ1Q9ULJ6 1067 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 CHD8Q9HCK8 2581 aa9.8□□□□□ -0.84
USP54-207ENST00000451492 KNL1Q8NG31 2342 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 FPGTO14772 594 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 YKT6O15498 198 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 AP1G1O43747 822 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 MAP3K6O95382 1288 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 PROS1P07225 676 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 TPM1P09493 284 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 PCK1P35558 622 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 ADKP55263 362 aaKnown RBP9.79□□□□□ -0.84
USP54-207ENST00000451492 CDH6P55285 790 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 SLC25A11Q02978 314 aaKnown RBP9.79□□□□□ -0.84
USP54-207ENST00000451492 MMRN1Q13201 1228 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 DPYSQ14117 519 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 PDE1CQ14123 709 aaPredicted RBP9.79□□□□□ -0.84
USP54-207ENST00000451492 PIGHQ14442 188 aaPredicted RBP9.79□□□□□ -0.84
USP54-207ENST00000451492 ZNF235Q14590 738 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 INO80DQ53TQ3 878 aaPredicted RBP9.79□□□□□ -0.84
USP54-207ENST00000451492 ZFYVE27Q5T4F4 411 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 SPECC1LQ69YQ0 1117 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 TMCO3Q6UWJ1 677 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 IQCHQ86VS3 1027 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 CAMK1DQ8IU85 385 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 RAB7BQ96AH8 199 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 VOPP1Q96AW1 172 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 IQCDQ96DY2 449 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 LRIG1Q96JA1 1093 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 CSPG4P5Q96PW8 444 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 TMEM121BQ9BXQ6 578 aaPredicted RBP9.79□□□□□ -0.84
USP54-207ENST00000451492 PCDH18Q9HCL0 1135 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 UCKL1Q9NWZ5 548 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 IP6K2Q9UHH9 426 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 IPO11Q9UI26 975 aaKnown RBP9.79□□□□□ -0.84
USP54-207ENST00000451492 MSRB2Q9Y3D2 182 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 CABIN1Q9Y6J0 2220 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 FREM2Q5SZK8 3169 aa9.79□□□□□ -0.84
USP54-207ENST00000451492 CXorf51AA0A1B0GTR3 108 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 A8MX80 341 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 EIF3CLB5ME19 914 aaKnown RBP9.78□□□□□ -0.84
USP54-207ENST00000451492 MYO1FO00160 1098 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 MUSKO15146 869 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 TSPAN6O43657 245 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 AKR1B10O60218 316 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 BUB1BO60566 1050 aaPredicted RBP9.78□□□□□ -0.84
USP54-207ENST00000451492 RFPL3O75679 317 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 NEBLO76041 1014 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 TM7SF2O76062 418 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 CYP1A2P05177 515 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 CD48P09326 243 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 MYF5P13349 255 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 TIMP2P16035 220 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 SERPINA4P29622 427 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 IGFALSP35858 605 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 SCNN1BP51168 640 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 DAB2P98082 770 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 IL10RBQ08334 325 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 OVGP1Q12889 678 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 TRIM14Q14142 442 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 DPYSL2Q16555 572 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 ATP13A4Q4VNC1 1196 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 HS1BP3Q53T59 392 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 TPRG1LQ5T0D9 272 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 KYAT3Q6YP21 454 aaKnown RBP9.78□□□□□ -0.84
USP54-207ENST00000451492 POLNQ7Z5Q5 900 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 SRLQ86TD4 932 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 ZSWIM9Q86XI8 627 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 PLPP6Q8IY26 295 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 ATPAF2Q8N5M1 289 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.78□□□□□ -0.84
USP54-207ENST00000451492 PDCD6IPQ8WUM4 868 aaKnown RBP9.78□□□□□ -0.84
USP54-207ENST00000451492 CTNNBL1Q8WYA6 563 aaPredicted RBP9.78□□□□□ -0.84
USP54-207ENST00000451492 BMFQ96LC9 184 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 EIF3CQ99613 913 aaKnown RBP9.78□□□□□ -0.84
USP54-207ENST00000451492 SUV39H2Q9H5I1 410 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 ATP13A3Q9H7F0 1226 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 ERVMER34-1Q9H9K5 563 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 PCDH12Q9NPG4 1184 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 ABHD10Q9NUJ1 306 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 SPTLC3Q9NUV7 552 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 ZNHIT6Q9NWK9 470 aaKnown RBP9.78□□□□□ -0.84
USP54-207ENST00000451492 DONSONQ9NYP3 566 aa9.78□□□□□ -0.84
USP54-207ENST00000451492 KMT2BQ9UMN6 2715 aaPredicted RBP9.78□□□□□ -0.84
USP54-207ENST00000451492 AREL1O15033 823 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 SCAMP1O15126 338 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 SIGLEC6O43699 453 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 MFSD11O43934 449 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 MFAP3LO75121 409 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 PIAS2O75928 621 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 PCCBP05166 539 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 C6P13671 934 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 DGKAP23743 735 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 RXRGP48443 463 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 THOP1P52888 689 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 MAXP61244 160 aa9.77□□□□□ -0.85
USP54-207ENST00000451492 BCL2L1Q07817 233 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms