RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 DEFB133Q30KQ1 61 aa16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 EFHC2Q5JST6 749 aa16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 DNAJC24Q6P3W2 148 aa16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 VPS36Q86VN1 386 aa16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 RTL3Q8N8U3 475 aaKnown RBP16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 LMX1AQ8TE12 382 aa16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 ASB12Q8WXK4 309 aa16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 MCEEQ96PE7 176 aa16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 AGPAT1Q99943 283 aa16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 TTYH3Q9C0H2 523 aa16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 RAI2Q9Y5P3 530 aa16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 CSNK1G3Q9Y6M4 447 aa16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 U3KQA8 63 aa16.8■□□□□ 0.28
RAB11FIP3-204ENST00000449879 RASA4BC9J798 803 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 AREL1O15033 823 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 AQP9O43315 295 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 RASA4O43374 803 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 IGSF6O95976 241 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 MPOP05164 745 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 GP1BAP07359 652 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 ZNF143P52747 638 aaPredicted RBP16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 THOP1P52888 689 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 YBEYP58557 167 aaPredicted RBP16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 PFN3P60673 137 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 C1QBPQ07021 282 aaKnown RBP16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 CCDC173Q0VFZ6 552 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 EIF2B5Q13144 721 aaKnown RBP16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 CDKN3Q16667 212 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 TBC1D25Q3MII6 688 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 INO80DQ53TQ3 878 aaPredicted RBP16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 CDCP2Q5VXM1 449 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 ZCCHC8Q6NZY4 707 aaKnown RBP16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 MON1BQ7L1V2 547 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 DENND6BQ8NEG7 585 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 SNIP1Q8TAD8 396 aaKnown RBP16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 IFI44Q8TCB0 444 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 MAPK15Q8TD08 544 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 CENPTQ96BT3 561 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 HMCESQ96FZ2 354 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 NAP1L5Q96NT1 182 aaPredicted RBP16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 DEPDC7Q96QD5 511 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 IL12RB2Q99665 862 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 EPAS1Q99814 870 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 USP29Q9HBJ7 922 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 FZD10Q9ULW2 581 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 LOC400499M0QZD8 3231 aa16.79■□□□□ 0.28
RAB11FIP3-204ENST00000449879 TCRBV5S1A1TA0A578 114 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 INSIG1O15503 277 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 USP12O75317 370 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 CSO75390 466 aaKnown RBP16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 TM7SF2O76062 418 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 TIMP2P16035 220 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 C1orf61Q13536 156 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 PTK2BQ14289 1009 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 DCUN1D2Q6PH85 259 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 RBFAQ8N0V3 343 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 CXorf40AQ8TE69 158 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 CASKIN2Q8WXE0 1202 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 EXOC2Q96KP1 924 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 CNPY3Q9BT09 278 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 WRAP53Q9BUR4 548 aaKnown RBP16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 TCEAL2Q9H3H9 227 aaPredicted RBP16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 CATSPERBQ9H7T0 1116 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 SPASTQ9UBP0 616 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 RP1P56715 2156 aa16.78■□□□□ 0.28
RAB11FIP3-204ENST00000449879 XPAP23025 273 aaPredicted RBP16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 IGFALSP35858 605 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 ADKP55263 362 aaKnown RBP16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 UBASH3AP57075 661 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 SERINC3Q13530 473 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 NR1I3Q14994 352 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 CYTH1Q15438 398 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 PARP15Q460N3 678 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 PRRT3Q5FWE3 981 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 FAXCQ5TGI0 409 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 ACAD10Q6JQN1 1059 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 GUSBP11Q6P575 273 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 EFL1Q7Z2Z2 1120 aaKnown RBP16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 BTN2A2Q8WVV5 523 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 NAF1Q96HR8 494 aaKnown RBP16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 C1QTNF7Q9BXJ2 289 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 PRORYQ9H606 182 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 MBNL1Q9NR56 388 aaKnown RBP16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 APOBEC3BQ9UH17 382 aaKnown RBP16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 SALL4Q9UJQ4 1053 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 MYO6Q9UM54 1294 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 MFHAS1Q9Y4C4 1052 aa16.77■□□□□ 0.28
RAB11FIP3-204ENST00000449879 WASH4PA8MWX3 477 aa16.76■□□□□ 0.27
RAB11FIP3-204ENST00000449879 TPP1O14773 563 aa16.76■□□□□ 0.27
RAB11FIP3-204ENST00000449879 GCATO75600 419 aa16.76■□□□□ 0.27
RAB11FIP3-204ENST00000449879 CCDC172P0C7W6 258 aa16.76■□□□□ 0.27
RAB11FIP3-204ENST00000449879 TGM2P21980 687 aa16.76■□□□□ 0.27
RAB11FIP3-204ENST00000449879 EIF4A3P38919 411 aaKnown RBP16.76■□□□□ 0.27
RAB11FIP3-204ENST00000449879 YPEL5P62699 121 aa16.76■□□□□ 0.27
RAB11FIP3-204ENST00000449879 GABREP78334 506 aa16.76■□□□□ 0.27
RAB11FIP3-204ENST00000449879 PPP1R15BQ5SWA1 713 aa16.76■□□□□ 0.27
RAB11FIP3-204ENST00000449879 CRTC1Q6UUV9 634 aa16.76■□□□□ 0.27
RAB11FIP3-204ENST00000449879 PHACTR4Q8IZ21 702 aa16.76■□□□□ 0.27
RAB11FIP3-204ENST00000449879 MCOLN2Q8IZK6 566 aa16.76■□□□□ 0.27
RAB11FIP3-204ENST00000449879 UMODL1-AS1Q8N2C9 162 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms