RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 H3BM21 787 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 H3BRJ5 948 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 AREL1O15033 823 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 INSIG1O15503 277 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 MMP20O60882 483 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 PALMO75781 387 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 PIAS2O75928 621 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 TM7SF2O76062 418 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 PIGNO95427 931 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 ALPPL2P10696 532 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 DGKAP23743 735 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 ARL4AP40617 200 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 HCAR3P49019 387 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 ACADVLP49748 655 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 SUOXP51687 545 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 HNRNPKP61978 463 aaKnown RBP eCLIP15.45■□□□□ 0.062e-6■■■■□ 25.9
CHD3-205ENST00000449744 DAB2P98082 770 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 ELP6Q0PNE2 266 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 PDE1CQ14123 709 aaPredicted RBP15.45■□□□□ 0.06
CHD3-205ENST00000449744 BOLA3Q53S33 107 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 CYP4V2Q6ZWL3 525 aaPredicted RBP15.45■□□□□ 0.06
CHD3-205ENST00000449744 TMPRSS12Q86WS5 348 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 SLC22A18ASQ8N1D0 253 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 SLC25A45Q8N413 288 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 LZTR1Q8N653 840 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 PAF1Q8N7H5 531 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 HCAR2Q8TDS4 363 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 HSPH1Q92598 858 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 VOPP1Q96AW1 172 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 CINPQ9BW66 212 aaPredicted RBP15.45■□□□□ 0.06
CHD3-205ENST00000449744 THAP2Q9H0W7 228 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 SUV39H2Q9H5I1 410 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 CWC15Q9P013 229 aaKnown RBP15.45■□□□□ 0.06
CHD3-205ENST00000449744 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.45■□□□□ 0.062e-7■■■■■ 29.5
CHD3-205ENST00000449744 IGF2RP11717 2491 aa15.45■□□□□ 0.06
CHD3-205ENST00000449744 PTPRBP23467 1997 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 FAM149AA5PLN7 773 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 NEMP2A6NFY4 417 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 SRRM3A6NNA2 597 aaPredicted RBP15.44■□□□□ 0.06
CHD3-205ENST00000449744 FFAR2O15552 330 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 SPINT1O43278 529 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 SIGLEC6O43699 453 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 JUPP14923 745 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 TIMP2P16035 220 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 HNF1BP35680 557 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 THOP1P52888 689 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 IL10RBQ08334 325 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 ZNF211Q13398 564 aaPredicted RBP15.44■□□□□ 0.06
CHD3-205ENST00000449744 ILKQ13418 452 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 SMTNL2Q2TAL5 461 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 ZNF542PQ5EBM4 170 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 CCDC122Q5T0U0 273 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 ERAP2Q6P179 960 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 PARGQ86W56 976 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 MARCH9Q86YJ5 346 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 TSC1Q92574 1164 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 ZNF641Q96N77 438 aaPredicted RBP15.44■□□□□ 0.06
CHD3-205ENST00000449744 TUBGCP5Q96RT8 1024 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 KLF6Q99612 283 aaPredicted RBP15.44■□□□□ 0.06
CHD3-205ENST00000449744 WRAP53Q9BUR4 548 aaKnown RBP15.44■□□□□ 0.06
CHD3-205ENST00000449744 UCKL1Q9NWZ5 548 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 IP6K2Q9UHH9 426 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 ANAPC7Q9UJX3 599 aa15.44■□□□□ 0.06
CHD3-205ENST00000449744 PLXNB3Q9ULL4 1909 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 FRYQ5TBA9 3013 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 A0A087X0T9 212 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 SPTY2D1-AS1A0A0U1RR47 76 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 TRIM38O00635 465 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 GYPCP04921 128 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 FAM228BP0C875 321 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 ITIH2P19823 946 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 IL1R2P27930 398 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 SERPINA4P29622 427 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 CASP14P31944 242 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 SSR1P43307 286 aaKnown RBP15.43■□□□□ 0.06
CHD3-205ENST00000449744 PTK2BQ14289 1009 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 FZD2Q14332 565 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 RFTN1Q14699 578 aaPredicted RBP15.43■□□□□ 0.06
CHD3-205ENST00000449744 DPYSL2Q16555 572 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 UGP2Q16851 508 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 PROX2Q3B8N5 592 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 AFMIDQ63HM1 303 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 ALKBH5Q6P6C2 394 aaKnown RBP15.43■□□□□ 0.06
CHD3-205ENST00000449744 BRAT1Q6PJG6 821 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 SRLQ86TD4 932 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 ARHGAP12Q8IWW6 846 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 NPWQ8N729 165 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 TSEN2Q8NCE0 465 aaKnown RBP15.43■□□□□ 0.06
CHD3-205ENST00000449744 OR4C6Q8NH72 309 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 NUP85Q9BW27 656 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 ATP13A3Q9H7F0 1226 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 GPR27Q9NS67 375 aa15.43■□□□□ 0.06
CHD3-205ENST00000449744 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.43■□□□□ 0.06
CHD3-205ENST00000449744 TRABD2BA6NFA1 517 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 MYO1FO00160 1098 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 CBFA2T2O43439 604 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 CSF2P04141 144 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 RARAP10276 462 aa15.42■□□□□ 0.06
CHD3-205ENST00000449744 NME1P15531 152 aaKnown RBP15.42■□□□□ 0.06
CHD3-205ENST00000449744 AMPD1P23109 780 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms