RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 TRIM15Q9C019 465 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 ANKHQ9HCJ1 492 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 KMT5AQ9NQR1 393 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 CD300AQ9UGN4 299 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 SEPT9Q9UHD8 586 aaPredicted RBP19.37■□□□□ 0.69
HMGA1-205ENST00000447654 MID2Q9UJV3 735 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 ZNF229Q9UJW7 825 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 CNTN6Q9UQ52 1028 aa19.37■□□□□ 0.69
HMGA1-205ENST00000447654 GABBR2O75899 941 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 ALDH1A2O94788 518 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 TOMM70O94826 608 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 SEC24DO94855 1032 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-205ENST00000447654 LSM8O95777 96 aaKnown RBP19.36■□□□□ 0.69
HMGA1-205ENST00000447654 TOP3BO95985 862 aaKnown RBP19.36■□□□□ 0.69
HMGA1-205ENST00000447654 CDH1P12830 882 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 CD40LGP29965 261 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 CLK3P49761 638 aaKnown RBP19.36■□□□□ 0.69
HMGA1-205ENST00000447654 ATXN3P54252 364 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-205ENST00000447654 WDR44Q5JSH3 913 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 TAB3Q8N5C8 712 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-205ENST00000447654 Q8N9G6 341 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-205ENST00000447654 BEST2Q8NFU1 509 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 OR2T34Q8NGX1 318 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 OR2T3Q8NH03 318 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 CDKL2Q92772 493 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 CDK5RAP1Q96SZ6 601 aaKnown RBP19.36■□□□□ 0.69
HMGA1-205ENST00000447654 AQP12BA6NM10 295 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 TPP1O14773 563 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 AURKAO14965 403 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 MAN1A2O60476 641 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 BCAS1O75363 584 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-205ENST00000447654 KCNH1O95259 989 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 KRT8P05787 483 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 TCN1P20061 433 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-205ENST00000447654 GNA15P30679 374 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 NUDT1P36639 197 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 SLC25A11Q02978 314 aaKnown RBP19.36■□□□□ 0.69
HMGA1-205ENST00000447654 MMRN1Q13201 1228 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 NOMO1Q15155 1222 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 CDONQ4KMG0 1287 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 CCSAPQ6IQ19 270 aaPredicted RBP19.36■□□□□ 0.69
HMGA1-205ENST00000447654 AQP12AQ8IXF9 295 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 FKBP10Q96AY3 582 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 HDAC11Q96DB2 347 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 CEP295NLQ96MC4 621 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 MCEEQ96PE7 176 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 EMILIN2Q9BXX0 1053 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 RNPEPQ9H4A4 650 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 RAB6BQ9NRW1 208 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 GMIPQ9P107 970 aa19.36■□□□□ 0.69
HMGA1-205ENST00000447654 FADS2P1A8MWK0 482 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 CALCAP01258 141 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 PSAPP07602 524 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 FCGR1AP12314 374 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 GARTP22102 1010 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 PKLRP30613 574 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 CASP3P42574 277 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 COPZ1P61923 177 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 IGBP1P78318 339 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 CTAG1AP78358 180 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 KRR1Q13601 381 aaKnown RBP19.35■□□□□ 0.69
HMGA1-205ENST00000447654 C15orf59Q2T9L4 293 aaPredicted RBP19.35■□□□□ 0.69
HMGA1-205ENST00000447654 SUPT20HL1Q3ZLR7 823 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 BRDTQ58F21 947 aaPredicted RBP19.35■□□□□ 0.69
HMGA1-205ENST00000447654 STEAP4Q687X5 459 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 LMBRD2Q68DH5 695 aaPredicted RBP19.35■□□□□ 0.69
HMGA1-205ENST00000447654 XAF1Q6GPH4 301 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 HACD2Q6Y1H2 254 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 CENPNQ96H22 339 aaPredicted RBP19.35■□□□□ 0.69
HMGA1-205ENST00000447654 NOL6Q9H6R4 1146 aaKnown RBP19.35■□□□□ 0.69
HMGA1-205ENST00000447654 SPAG4Q9NPE6 437 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 AGPAT4Q9NRZ5 378 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 CDYLQ9Y232 598 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 SBF1O95248 1867 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 LOC285556D6RIA3 1793 aa19.35■□□□□ 0.69
HMGA1-205ENST00000447654 B8ZZF3 427 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 TIPRLO75663 272 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 ACO1P21399 889 aaKnown RBP19.34■□□□□ 0.69
HMGA1-205ENST00000447654 GRK3P35626 688 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 ARCN1P48444 511 aaKnown RBP19.34■□□□□ 0.69
HMGA1-205ENST00000447654 SLC26A2P50443 739 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 PPP5CP53041 499 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 PDK2Q15119 407 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 MTERF2Q49AM1 385 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 RBM48Q5RL73 367 aaKnown RBP19.34■□□□□ 0.69
HMGA1-205ENST00000447654 CRTC3Q6UUV7 619 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 LBX2Q6XYB7 198 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 C15orf39Q6ZRI6 1047 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 CYP4V2Q6ZWL3 525 aaPredicted RBP19.34■□□□□ 0.69
HMGA1-205ENST00000447654 MOB2Q70IA6 237 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 DHFR2Q86XF0 187 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 SPATA18Q8TC71 538 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 CYGBQ8WWM9 190 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 SIGLEC10Q96LC7 697 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 LHPPQ9H008 270 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 CCDC177Q9NQR7 707 aaPredicted RBP19.34■□□□□ 0.69
HMGA1-205ENST00000447654 DIABLOQ9NR28 239 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 SMPD3Q9NY59 655 aaPredicted RBP19.34■□□□□ 0.69
HMGA1-205ENST00000447654 PPP2R3BQ9Y5P8 575 aa19.34■□□□□ 0.69
HMGA1-205ENST00000447654 DICER1Q9UPY3 1922 aaKnown RBP19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms