RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 SPARCL1Q14515 664 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 PRPSAP1Q14558 356 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 RALGPS1Q5JS13 557 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 ZNF776Q68DI1 518 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 GDPD4Q6W3E5 623 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 SYDE1Q6ZW31 735 aaPredicted RBP18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 IPMKQ8NFU5 416 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 KLHL32Q96NJ5 620 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 TUBGCP5Q96RT8 1024 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 CPEB1Q9BZB8 566 aaKnown RBP18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 PPM1HQ9ULR3 514 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 CHKBQ9Y259 395 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 MUC3AQ02505 3323 aa18.17■□□□□ 0.5
TRAPPC4-203ENST00000447216 LRRK1Q38SD2 2015 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 DOCK9Q9BZ29 2069 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 KMT2EQ8IZD2 1858 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 RIOK3O14730 519 aaKnown RBP18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 MID1O15344 667 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 RNASEH1O60930 286 aaKnown RBP18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 ANXA9O76027 345 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 GABRG2P18507 467 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 NDUFV2P19404 249 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 SERPINA4P29622 427 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 CLCN5P51795 746 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 DGKEP52429 567 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 SEMA5AQ13591 1074 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 KIAA1324Q6UXG2 1013 aaKnown RBP18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 C4orf22Q6V702 233 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 DSG4Q86SJ6 1040 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 ZSWIM9Q86XI8 627 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 TMPRSS6Q8IU80 811 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 PAF1Q8N7H5 531 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 PDCD7Q8N8D1 485 aaKnown RBP18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 TMEM105Q8N8V8 129 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 TMIEQ8NEW7 156 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 PDCD6IPQ8WUM4 868 aaKnown RBP18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 HMGB4Q8WW32 186 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 ARRDC3Q96B67 414 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 MRGPRX2Q96LB1 330 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 FICDQ9BVA6 458 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 DPH5Q9H2P9 285 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 SUV39H2Q9H5I1 410 aa18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 POLMQ9NP87 494 aaPredicted RBP18.16■□□□□ 0.5
TRAPPC4-203ENST00000447216 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 TCRBV7S3A2A0A539 114 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 EFCAB8A8MWE9 144 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 E7EVH7 732 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 C1QTNF3-AMACRE9PGA6 284 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 TRAFD1O14545 582 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 SLU7O95391 586 aaKnown RBP18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 PDHA1P08559 390 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 IVDP26440 423 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 SLC8A1P32418 973 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 MAGEA9P43362 315 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 LMAN1P49257 510 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 MPP3Q13368 585 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 GRM3Q14832 879 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 CST6Q15828 149 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 TEX35Q5T0J7 233 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 ANKRD22Q5VYY1 191 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 KLHDC8BQ8IXV7 354 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 TSTD1Q8NFU3 115 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 MRGPRX1Q96LB2 322 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 APOL2Q9BQE5 337 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 ERP44Q9BS26 406 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 TDRD1Q9BXT4 1180 aaKnown RBP18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 OSBPL1AQ9BXW6 950 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 FBRSQ9HAH7 460 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 SPATA6Q9NWH7 488 aaPredicted RBP18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 SNX24Q9Y343 169 aa18.15■□□□□ 0.5
TRAPPC4-203ENST00000447216 HTRA2O43464 458 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 SOCS5O75159 536 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 USP12O75317 370 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 HEXIM1O94992 359 aaKnown RBP18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 SLC34A2O95436 690 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 AGTP01019 485 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 PRLP01236 227 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 PRKCGP05129 697 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 APRTP07741 180 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 CHRNA4P43681 627 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 RPL21P46778 160 aaKnown RBP18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 CXCL12P48061 93 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 GALNT3Q14435 633 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 SLC14A2Q15849 920 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 ZNF805Q5CZA5 627 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 LRRC73Q5JTD7 316 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 IZUMO3Q5VZ72 239 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 KCTD11Q693B1 232 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 ANO7Q6IWH7 933 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 PARS2Q7L3T8 475 aaKnown RBP18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 PGBD3Q8N328 593 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 FBXL6Q8N531 539 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 SLC25A41Q8N5S1 370 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 CCHCR1Q8TD31 782 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 CPT1BQ92523 772 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 LRRC45Q96CN5 670 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 SIPA1Q96FS4 1042 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 LRIG1Q96JA1 1093 aa18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 ZNF641Q96N77 438 aaPredicted RBP18.14■□□□□ 0.49
TRAPPC4-203ENST00000447216 SMIM14Q96QK8 99 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms