RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 CTNNA2P26232 953 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 MAT2AP31153 395 aaKnown RBP17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 CETN2P41208 172 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 AFF3P51826 1226 aaKnown RBP17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 RWDD2BP57060 319 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 CCZ1BP86790 482 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 CCZ1P86791 482 aaPredicted RBP17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 BCL2L1Q07817 233 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 PDK1Q15118 436 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 TTC7BQ86TV6 843 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 NT5DC3Q86UY8 548 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 CCDC13Q8IYE1 715 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 UBL4BQ8N7F7 174 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 VOPP1Q96AW1 172 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 HDAC11Q96DB2 347 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 MGME1Q9BQP7 344 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 EDEM2Q9BV94 578 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 SUV39H2Q9H5I1 410 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 CAPN10Q9HC96 672 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 NT5MQ9NPB1 228 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 SCUBE2Q9NQ36 999 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 GUCA1BQ9UMX6 200 aa17.65■□□□□ 0.42
SMARCAL1-209ENST00000444508 hCG_1818297A0A087WSY0 165 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 A0A1W2PQU0 124 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 MIF4GDA9UHW6 222 aaKnown RBP17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 LATO43561 262 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 SYPP08247 313 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 ENGP17813 658 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 SDHBP21912 280 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 TGM2P21980 687 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 NR2C2P49116 596 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 SUOXP51687 545 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 ATXN3P54252 364 aaPredicted RBP17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 COPS2P61201 443 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 PPIDQ08752 370 aaKnown RBP17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 ITKQ08881 620 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 LLGL1Q15334 1064 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 TEAD4Q15561 434 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 PPP2R5EQ16537 467 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 SETMARQ53H47 684 aaPredicted RBP17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 RALGPS1Q5JS13 557 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 BRAT1Q6PJG6 821 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 NPNTQ6UXI9 565 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 HORMAD1Q86X24 394 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 CAMK1DQ8IU85 385 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 PGBD5Q8N414 524 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 TEX26Q8N6G2 289 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 C1orf216Q8TAB5 229 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 NETO1Q8TDF5 533 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 MAML1Q92585 1016 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 FEM1CQ96JP0 617 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 NUDCD1Q96RS6 583 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 LGMNQ99538 433 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 POLR1EQ9GZS1 481 aaKnown RBP17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 BRD8Q9H0E9 1235 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 TM9SF3Q9HD45 589 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 AASDHPPTQ9NRN7 309 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 AMACRQ9UHK6 382 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 FADS3Q9Y5Q0 445 aa17.64■□□□□ 0.41
SMARCAL1-209ENST00000444508 SPTBN4Q9H254 2564 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 CACNA1EQ15878 2313 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 C10orf142B7Z368 130 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 ARHGAP33O14559 1287 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 TSPAN6O43657 245 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 GDF9O60383 454 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 PTMAP06454 111 aaKnown RBP17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 CCNB1P14635 433 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 ABL2P42684 1182 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 MAXP61244 160 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 RPS21P63220 83 aaKnown RBP17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 RACK1P63244 317 aaKnown RBP17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 AP1B1Q10567 949 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 CCDC181Q5TID7 509 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 KIAA1161Q6NSJ0 714 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 ADAT2Q7Z6V5 191 aaKnown RBP17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 ZSCAN30Q86W11 494 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 LRRN4Q8WUT4 740 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 SKA1Q96BD8 255 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 SERAC1Q96JX3 654 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 OLFM3Q96PB7 478 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 ORAI3Q9BRQ5 295 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 GTPBP2Q9BX10 602 aaKnown RBP17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 EBF2Q9HAK2 575 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 RXFP3Q9NSD7 469 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 RBM22Q9NW64 420 aaKnown RBP eCLIP17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 CDV3Q9UKY7 258 aaKnown RBP17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 DMTF1Q9Y222 760 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 TTLL3Q9Y4R7 772 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 CAPN6Q9Y6Q1 641 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 LAMA1P25391 3075 aa17.63■□□□□ 0.41
SMARCAL1-209ENST00000444508 ANKRD36A6QL64 1941 aa17.62■□□□□ 0.41
SMARCAL1-209ENST00000444508 TSPAN11A1L157 253 aa17.62■□□□□ 0.41
SMARCAL1-209ENST00000444508 UPK3BL1B0FP48 263 aa17.62■□□□□ 0.41
SMARCAL1-209ENST00000444508 UPK3BL2E5RIL1 263 aa17.62■□□□□ 0.41
SMARCAL1-209ENST00000444508 GJB3O75712 270 aa17.62■□□□□ 0.41
SMARCAL1-209ENST00000444508 FTCDO95954 541 aa17.62■□□□□ 0.41
SMARCAL1-209ENST00000444508 TIMP2P16035 220 aa17.62■□□□□ 0.41
SMARCAL1-209ENST00000444508 CR2P20023 1033 aa17.62■□□□□ 0.41
SMARCAL1-209ENST00000444508 GRIA4P48058 902 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms