RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 NDST2P52849 883 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 RPS21P63220 83 aaKnown RBP11.01□□□□□ -0.65
SF3A1-203ENST00000444440 ZBED6P86452 979 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 SEMG2Q02383 582 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 SLC25A11Q02978 314 aaKnown RBP11.01□□□□□ -0.65
SF3A1-203ENST00000444440 OVGP1Q12889 678 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 ZNF542PQ5EBM4 170 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 KIAA1161Q6NSJ0 714 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 Q6ZSR6 202 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 NYAP1Q6ZVC0 841 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 TMPRSS7Q7RTY8 843 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 PTAR1Q7Z6K3 402 aaPredicted RBP11.01□□□□□ -0.65
SF3A1-203ENST00000444440 TSEN2Q8NCE0 465 aaKnown RBP11.01□□□□□ -0.65
SF3A1-203ENST00000444440 ZCCHC14Q8WYQ9 949 aaKnown RBP11.01□□□□□ -0.65
SF3A1-203ENST00000444440 TSC1Q92574 1164 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 SYN2Q92777 582 aaPredicted RBP11.01□□□□□ -0.65
SF3A1-203ENST00000444440 C1QTNF2Q9BXJ5 285 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 UBA2Q9UBT2 640 aaPredicted RBP11.01□□□□□ -0.65
SF3A1-203ENST00000444440 COQ6Q9Y2Z9 468 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 SCINQ9Y6U3 715 aa11.01□□□□□ -0.65
SF3A1-203ENST00000444440 TTC24A2A3L6 582 aaPredicted RBP11□□□□□ -0.65
SF3A1-203ENST00000444440 A6NNZ2 444 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 YKT6O15498 198 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 PRPSAP2O60256 369 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 MMP20O60882 483 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 RNF8O76064 485 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 LDOC1O95751 146 aaPredicted RBP11□□□□□ -0.65
SF3A1-203ENST00000444440 PRKCGP05129 697 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 MYBL1P10243 752 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 DESP17661 470 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 AMPD1P23109 780 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 DGKAP23743 735 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 HTR7P34969 479 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 ARRB1P49407 418 aaPredicted RBP11□□□□□ -0.65
SF3A1-203ENST00000444440 CCDC15Q0P6D6 951 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 CAMK2BQ13554 666 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 FZD2Q14332 565 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 SMAD1Q15797 465 aaKnown RBP11□□□□□ -0.65
SF3A1-203ENST00000444440 DPYSL2Q16555 572 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 PROX2Q3B8N5 592 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 KYAT3Q6YP21 454 aaKnown RBP11□□□□□ -0.65
SF3A1-203ENST00000444440 POLNQ7Z5Q5 900 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 OXR1Q8N573 874 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 MDM1Q8TC05 714 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 CASKIN2Q8WXE0 1202 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 HSPH1Q92598 858 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 CENPTQ96BT3 561 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 LRIG1Q96JA1 1093 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 FEM1CQ96JP0 617 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11□□□□□ -0.65
SF3A1-203ENST00000444440 OSBPL1AQ9BXW6 950 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 PACSIN1Q9BY11 444 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 CPEB1Q9BZB8 566 aaKnown RBP11□□□□□ -0.65
SF3A1-203ENST00000444440 TCEAL2Q9H3H9 227 aaPredicted RBP11□□□□□ -0.65
SF3A1-203ENST00000444440 ZWILCHQ9H900 591 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 MBNL1Q9NR56 388 aaKnown RBP11□□□□□ -0.65
SF3A1-203ENST00000444440 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11□□□□□ -0.659e-9■□□□□ 11.3
SF3A1-203ENST00000444440 HS3ST3A1Q9Y663 406 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 BZW2Q9Y6E2 419 aaKnown RBP11□□□□□ -0.65
SF3A1-203ENST00000444440 BPTFQ12830 3046 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 APC2O95996 2303 aa11□□□□□ -0.65
SF3A1-203ENST00000444440 PKD1L2Q7Z442 2459 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 LY6G6EA0A0G2JKS1 128 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 TSPAN11A1L157 253 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 ARHGAP42A6NI28 874 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 SRRM3A6NNA2 597 aaPredicted RBP10.99□□□□□ -0.65
SF3A1-203ENST00000444440 DFFAO00273 331 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 FFAR2O15552 330 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 TSPAN6O43657 245 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 SIGLEC6O43699 453 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 PIAS2O75928 621 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 NEBLO76041 1014 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 PEX11BO96011 259 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 CYP1A2P05177 515 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 CD48P09326 243 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 RARAP10276 462 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 PCK1P35558 622 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 PFN3P60673 137 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 MMRN1Q13201 1228 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 ATP13A4Q4VNC1 1196 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 TTC7BQ86TV6 843 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 VPS36Q86VN1 386 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 CAMK1DQ8IU85 385 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 PGBD5Q8N414 524 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 NIPA2Q8N8Q9 360 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 TP53I13Q8NBR0 393 aaPredicted RBP10.99□□□□□ -0.65
SF3A1-203ENST00000444440 FUBP1Q96AE4 644 aaKnown RBP10.99□□□□□ -0.65
SF3A1-203ENST00000444440 RAB7BQ96AH8 199 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 TRIM11Q96F44 468 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 LENG8Q96PV6 779 aaPredicted RBP10.99□□□□□ -0.65
SF3A1-203ENST00000444440 WRAP53Q9BUR4 548 aaKnown RBP10.99□□□□□ -0.65
SF3A1-203ENST00000444440 NUP85Q9BW27 656 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.99□□□□□ -0.65
SF3A1-203ENST00000444440 KLHL11Q9NVR0 708 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 DKK3Q9UBP4 350 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 ANAPC7Q9UJX3 599 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 LUC7L2Q9Y383 392 aaKnown RBP10.99□□□□□ -0.65
SF3A1-203ENST00000444440 U3KQA8 63 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 ACACAQ13085 2346 aa10.99□□□□□ -0.65
SF3A1-203ENST00000444440 ANKRD11Q6UB99 2663 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms