RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 LOC285095A0A1B0GVY8 99 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 A0A1W2PQ67 120 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 H3BNC9 293 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 SNX3O60493 162 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 RFPL1O75677 317 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 RPP40O75818 363 aaKnown RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 C1QAP02745 245 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 RECQLP46063 649 aaPredicted RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 ERVFC1P60507 584 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 RPL26P61254 145 aaKnown RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 IFT88Q13099 833 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 MPP2Q14168 576 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 AARS2Q5JTZ9 985 aaKnown RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 KDELC2Q7Z4H8 507 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 YTHDF3Q7Z739 585 aaKnown RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 PIGWQ7Z7B1 504 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 CRLF3Q8IUI8 442 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 CNTN4Q8IWV2 1026 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 DCLK2Q8N568 766 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 EFHBQ8N7U6 833 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 BRSK1Q8TDC3 778 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 BLOC1S5Q8TDH9 187 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 SH3RF2Q8TEC5 729 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 SPOCK2Q92563 424 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 SCYL1Q96KG9 808 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 FCRL3Q96P31 734 aaPredicted RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 TSSK1BQ9BXA7 367 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 MFSD1Q9H3U5 465 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 DZANK1Q9NVP4 752 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 PHTF1Q9UMS5 762 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 RPL26L1Q9UNX3 145 aaKnown RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 USH1CQ9Y6N9 552 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 A0A096LPK6 155 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 WDR91A4D1P6 747 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 KLF11O14901 512 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 GRM6O15303 877 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 UGT1A9O60656 530 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 EDF1O60869 148 aaKnown RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 CLASP2O75122 1294 aaKnown RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 SIN3BO75182 1162 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 TMCC1O94876 653 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 GLP2RO95838 553 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 STMN1P16949 149 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 SYN1P17600 705 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 OGNP20774 298 aaKnown RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 GRK2P25098 689 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 PMLP29590 882 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 NNMTP40261 264 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 CSKP41240 450 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 POU4F1Q01851 419 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 STX3Q13277 289 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 GRM3Q14832 879 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 RAB30Q15771 203 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 SIRPB2Q5JXA9 342 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 ARMC12Q5T9G4 340 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 ZNF470Q6ECI4 717 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 DENND5AQ6IQ26 1287 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 AFTPHQ6ULP2 937 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 FAM47EQ6ZV65 393 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 GAREM2Q75VX8 874 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 GALNT7Q86SF2 657 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 SRLQ86TD4 932 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 KIRREL3Q8IZU9 778 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 ARMC2Q8NEN0 867 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 FIBINQ8TAL6 211 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 TADA1Q96BN2 335 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 ELMO2Q96JJ3 720 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 CYP2S1Q96SQ9 504 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 GPR22Q99680 433 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 UGT1A7Q9HAW7 530 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 UGT1A10Q9HAW8 530 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 UGT1A8Q9HAW9 530 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 SNX15Q9NRS6 342 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 SLC39A10Q9ULF5 831 aa6.08□□□□□ -1.44
VPS50-205ENST00000441602 MRPS23Q9Y3D9 190 aaKnown RBP6.08□□□□□ -1.44
VPS50-205ENST00000441602 ZNF638Q14966 1978 aaKnown RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 A0A0D9SEW6 157 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 STX7O15400 261 aaKnown RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 ATP5BP06576 529 aaKnown RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 RHOP08100 348 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 DHRS4L1P0CG22 281 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 CSNK1DP48730 415 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 CLCN4P51793 760 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 SNRPD1P62314 119 aaKnown RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 OLIG2Q13516 323 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 TAF1AQ15573 450 aaPredicted RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 CNGA3Q16281 694 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 N4BP2L1Q5TBK1 243 aaPredicted RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 ESRP1Q6NXG1 681 aaKnown RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 TMEM150AQ86TG1 271 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 TBC1D1Q86TI0 1168 aaPredicted RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 CMTM8Q8IZV2 173 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 RYBPQ8N488 228 aaPredicted RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 AFAP1L2Q8N4X5 818 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 LPCAT1Q8NF37 534 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 SHKBP1Q8TBC3 707 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 SLC22A17Q8WUG5 538 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 ISL2Q96A47 359 aa6.07□□□□□ -1.44
VPS50-205ENST00000441602 ZFRQ96KR1 1074 aaKnown RBP6.07□□□□□ -1.44
VPS50-205ENST00000441602 CDCA3Q99618 268 aaPredicted RBP6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms