RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 TMEM53Q6P2H8 277 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CYB5D1Q6P9G0 228 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 Q6ZVL8 140 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 VPS36Q86VN1 386 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 FAM228AQ86W67 206 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ARMC8Q8IUR7 673 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 SYCP3Q8IZU3 236 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 SCAMP5Q8TAC9 235 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 HASPINQ8TF76 798 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PRCCQ92733 491 aaPredicted RBP5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 RNF125Q96EQ8 232 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 C7orf34Q96L11 122 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 UHRF1Q96T88 793 aaPredicted RBP5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PRRX2Q99811 253 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 C1orf43Q9BWL3 253 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 FTOQ9C0B1 505 aaKnown RBP eCLIP5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ANKRD2Q9GZV1 360 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 NOD2Q9HC29 1040 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CFAP97Q9P2B7 532 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TUBGCP4Q9UGJ1 667 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 USP21Q9UK80 565 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PALD1Q9ULE6 856 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CFL2Q9Y281 166 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 DLGAP4Q9Y2H0 992 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 LMO7Q8WWI1 1683 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 LRRD1A4D1F6 860 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 A8MXE2 369 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 O00370 1275 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ZNF263O14978 683 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 VILLO15195 856 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TP73O15350 636 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CUTAO60888 179 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 SMIM24O75264 130 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PRAMEF12O95522 483 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ANXA1P04083 346 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PRKCBP05771 671 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 NPPBP16860 134 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 IL1R2P27930 398 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 BCAT1P54687 386 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PRRX1P54821 245 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ALDH18A1P54886 795 aaKnown RBP5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 VBP1P61758 197 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 MEF2AQ02078 507 aaPredicted RBP5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 KHDRBS1Q07666 443 aaKnown RBP eCLIP5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 STIM1Q13586 685 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PUM1Q14671 1186 aaKnown RBP eCLIP5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PPP6R3Q5H9R7 873 aaPredicted RBP5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ATG16L1Q676U5 607 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TRAT1Q6PIZ9 186 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TRIM65Q6PJ69 517 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 Q6ZS46 218 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 BBS12Q6ZW61 710 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 KRT28Q7Z3Y7 464 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 SLCO6A1Q86UG4 719 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 MRPL43Q8N983 215 aaKnown RBP5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 FIBINQ8TAL6 211 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ZNF671Q8TAW3 534 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 URGCPQ8TCY9 931 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 STAMQ92783 540 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 EXT2Q93063 718 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 NEIL1Q96FI4 390 aaPredicted RBP5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CAMK1GQ96NX5 476 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TRAPPC9Q96Q05 1148 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 WRNIP1Q96S55 665 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CRNKL1Q9BZJ0 848 aaKnown RBP5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 USP44Q9H0E7 712 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 RRAGCQ9HB90 399 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 HEYLQ9NQ87 328 aaPredicted RBP5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CYP46A1Q9Y6A2 500 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CLCA3PQ9Y6N3 262 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 NCAPD2Q15021 1401 aa5.98□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 KDM3BQ7LBC6 1761 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PNMA6EA0A0J9YXQ4 647 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TMEM232C9JQI7 657 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 F2RL2O00254 374 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ATP2A1O14983 1001 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PER2O15055 1255 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CD3EAPO15446 510 aaKnown RBP5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 HNRNPRO43390 633 aaKnown RBP5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 MPIG6BO95866 241 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 WEE2P0C1S8 567 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 RALAP11233 206 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 IDO1P14902 403 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 EGR1P18146 543 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 APEX1P27695 318 aaKnown RBP5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ALDH3A1P30838 453 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PIP4K2AP48426 406 aaPredicted RBP5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PCP4P48539 62 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PIK3CGP48736 1102 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 GNAQP50148 359 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 CCR3P51677 355 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TUBA4AP68366 448 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 PRKCEQ02156 737 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 KCNC3Q14003 757 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 DUSP28Q4G0W2 176 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 GLRA4Q5JXX5 417 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 NDUFAF5Q5TEU4 345 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 ATL3Q6DD88 541 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 TUBA3EQ6PEY2 450 aa5.97□□□□□ -1.45
ALMS1-IT1-201ENST00000441587 KLHL24Q6TFL4 600 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms