RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 METTL3Q86U44 580 aaKnown RBP13.29□□□□□ -0.28
CPSF4-206ENST00000441580 CRLF3Q8IUI8 442 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 KLHL23Q8NBE8 558 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 TSPAN17Q96FV3 270 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 ATXN7L3BQ96GX2 97 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 ZNF778Q96MU6 729 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 NUDCD1Q96RS6 583 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 SPON2Q9BUD6 331 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 RNF38Q9H0F5 515 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 ALG13Q9NP73 1137 aaKnown RBP13.29□□□□□ -0.28
CPSF4-206ENST00000441580 SCUBE2Q9NQ36 999 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 ASAH2Q9NR71 780 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 GKN1Q9NS71 199 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 THAP1Q9NVV9 213 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 SMPD4Q9NXE4 827 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.29□□□□□ -0.28
CPSF4-206ENST00000441580 GGT7Q9UJ14 662 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 TLK1Q9UKI8 766 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 MTO1Q9Y2Z2 717 aaKnown RBP13.29□□□□□ -0.28
CPSF4-206ENST00000441580 SH3BP1Q9Y3L3 701 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 ALPK3Q96L96 1907 aa13.29□□□□□ -0.28
CPSF4-206ENST00000441580 CXorf51AA0A1B0GTR3 108 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 CCDC78A2IDD5 438 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 H0Y626 953 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 MUSKO15146 869 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 INSIG1O15503 277 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 HNRNPCL1O60812 293 aaKnown RBP13.28□□□□□ -0.28
CPSF4-206ENST00000441580 TBL1XO60907 577 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 ATP5HO75947 161 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 CKMP06732 381 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 HDCP19113 662 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 CR2P20023 1033 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 CTNNB1P35222 781 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 SGSHP51688 502 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 SLC12A2P55011 1212 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 RAB10P61026 200 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 PRAMEP78395 509 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 MPP1Q00013 466 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 POU4F1Q01851 419 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 UBE3AQ05086 875 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 STX3Q13277 289 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 USP10Q14694 798 aaKnown RBP13.28□□□□□ -0.28
CPSF4-206ENST00000441580 CNGA3Q16281 694 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 GALNTL6Q49A17 601 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 MPP7Q5T2T1 576 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 RNF219Q5W0B1 726 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-206ENST00000441580 LILRA6Q6PI73 481 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 RAPH1Q70E73 1250 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 TMC7Q7Z402 723 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 ARL14EPQ8N8R7 260 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-206ENST00000441580 LEMD2Q8NC56 503 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 KREMEN2Q8NCW0 462 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 PHOSPHO2Q8TCD6 241 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 PPP4R1Q8TF05 950 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 USP13Q92995 863 aaPredicted RBP13.28□□□□□ -0.28
CPSF4-206ENST00000441580 LRRC37BQ96QE4 947 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 TRIB3Q96RU7 358 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 RAD9AQ99638 391 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 MECRQ9BV79 373 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 TDRD1Q9BXT4 1180 aaKnown RBP13.28□□□□□ -0.28
CPSF4-206ENST00000441580 WWP1Q9H0M0 922 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 RASSF4Q9H2L5 321 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 ATXN3LQ9H3M9 355 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 STN1Q9H668 368 aaKnown RBP13.28□□□□□ -0.28
CPSF4-206ENST00000441580 KCNK4Q9NYG8 393 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.28□□□□□ -0.28
CPSF4-206ENST00000441580 COPG2Q9UBF2 871 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 SLC2A6Q9UGQ3 507 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 FBXO5Q9UKT4 447 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 SLC39A10Q9ULF5 831 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 CAPN7Q9Y6W3 813 aa13.28□□□□□ -0.28
CPSF4-206ENST00000441580 TMEM114B3SHH9 223 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 ANKRD65E5RJM6 399 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 CBX4O00257 560 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 TSPAN3O60637 253 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 RPP40O75818 363 aaKnown RBP13.27□□□□□ -0.29
CPSF4-206ENST00000441580 CRTAMO95727 393 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 C2P06681 752 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 STMN1P16949 149 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 OGNP20774 298 aaKnown RBP13.27□□□□□ -0.29
CPSF4-206ENST00000441580 MAPK8P45983 427 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 ARFIP2P53365 341 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 CYP4F8P98187 520 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 ASPHQ12797 758 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 SF3A3Q12874 501 aaKnown RBP eCLIP13.27□□□□□ -0.293e-6■■■■□ 19.7
CPSF4-206ENST00000441580 BNIP1Q12981 228 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 MSLNQ13421 630 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-206ENST00000441580 INO80DQ53TQ3 878 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-206ENST00000441580 PPM1LQ5SGD2 360 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 C10orf67Q8IYJ2 551 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 CARNMT1Q8N4J0 409 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 OR52K2Q8NGK3 314 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 OR13J1Q8NGT2 312 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 BRSK1Q8TDC3 778 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 STYXQ8WUJ0 223 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 ERP27Q96DN0 273 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 TCF25Q9BQ70 676 aa13.27□□□□□ -0.29
CPSF4-206ENST00000441580 C2orf49Q9BVC5 232 aaPredicted RBP13.27□□□□□ -0.29
CPSF4-206ENST00000441580 SOBPA7XYQ1 873 aa13.26□□□□□ -0.29
CPSF4-206ENST00000441580 GOLGA8TH3BQL2 631 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms