RNA–Protein interactions for RNA: ENST00000440293.5

HDAC7-213, Transcript of histone deacetylase 7, human

TSL 4

Gene HDAC7, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC7-213	ENST00000440293	ACRBP	Q8NEB7	543 aa		18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	OR2T34	Q8NGX1	318 aa		18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	OR14C36	Q8NHC7	312 aa		18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	PCDH19	Q8TAB3	1148 aa		18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	SNX19	Q92543	992 aa		18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	SP110	Q9HB58	689 aa		18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	DYRK4	Q9NR20	520 aa		18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	KLHL11	Q9NVR0	708 aa		18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	DDX56	Q9NY93	547 aa	Known RBP	18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	RAX	Q9Y2V3	346 aa		18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	MFHAS1	Q9Y4C4	1052 aa		18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	HYOU1	Q9Y4L1	999 aa		18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	WASF2	Q9Y6W5	498 aa		18.33	■□□□□ 0.52
HDAC7-213	ENST00000440293	TRABD2B	A6NFA1	517 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	FAM47DP	A6NHR8	397 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	VILL	O15195	856 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	PJA2	O43164	708 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	PALM	O75781	387 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	IGSF6	O95976	241 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	C1S	P09871	688 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	TNNT1	P13805	278 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	METAP1	P53582	386 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	CNTN1	Q12860	1018 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	RFTN1	Q14699	578 aa	Predicted RBP	18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	POM121L1P	Q3SYA9	428 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	ARHGAP36	Q6ZRI8	547 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	VSIG1	Q86XK7	387 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	LRRC49	Q8IUZ0	686 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	TP53INP2	Q8IXH6	220 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	GRIN3A	Q8TCU5	1115 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	FAM131C	Q96AQ9	280 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	FAF2	Q96CS3	445 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	PPP1R16A	Q96I34	528 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	GDAP1L1	Q96MZ0	367 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	GRPEL1	Q9HAV7	217 aa		18.32	■□□□□ 0.52
HDAC7-213	ENST00000440293	ACACA	Q13085	2346 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	TBC1D3D	A0A087WVF3	549 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	TBC1D3I	A0A087WXS9	549 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	TBC1D3E	A0A087X179	549 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	TBC1D3K	A0A087X1G2	549 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	LRRD1	A4D1F6	860 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	TBC1D3F	A6NER0	549 aa	Predicted RBP	18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	ZNF487	B1APH4	448 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	TBC1D3L	B9A6J9	549 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	PLK4	O00444	970 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	KRIT1	O00522	736 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	YKT6	O15498	198 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	FSBP	O95073	299 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	TBC1D3H	P0C7X1	549 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	PAFAH1B3	Q15102	231 aa	Known RBP	18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	KIAA0895L	Q68EN5	471 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	TBC1D3G	Q6DHY5	549 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	TBC1D3C	Q6IPX1	549 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	C11orf63	Q6NUN7	778 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	NCEH1	Q6PIU2	408 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	TBC1D3	Q8IZP1	549 aa	Predicted RBP	18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	TPCN2	Q8NHX9	752 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	HNRNPLL	Q8WVV9	542 aa	Known RBP	18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	ARRDC3	Q96B67	414 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	ZNF599	Q96NL3	588 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	RNF157	Q96PX1	679 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	ORAI3	Q9BRQ5	295 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	MAK16	Q9BXY0	300 aa	Known RBP	18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	HDAC8	Q9BY41	377 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	LACRT	Q9GZZ8	138 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	KDM4C	Q9H3R0	1056 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	ZDHHC6	Q9H6R6	413 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	SALL4	Q9UJQ4	1053 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	BTBD3	Q9Y2F9	522 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	DUSP10	Q9Y6W6	482 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	LOC400499	M0QZD8	3231 aa		18.31	■□□□□ 0.52
HDAC7-213	ENST00000440293	CHD5	Q8TDI0	1954 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293		A0A1W2PPC4	97 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	KRT1	P04264	644 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	ADPRH	P54922	357 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	KIF5A	Q12840	1032 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	TMCO4	Q5TGY1	634 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	NCBP2-AS2	Q69YL0	99 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	ERN2	Q76MJ5	926 aa	Known RBP	18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	ADAT2	Q7Z6V5	191 aa	Known RBP	18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	DAAM2	Q86T65	1068 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	PQLC3	Q8N755	202 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	OR6K2	Q8NGY2	324 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	NSMCE1	Q8WV22	266 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	RNF25	Q96BH1	459 aa	Predicted RBP	18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	OSBPL1A	Q9BXW6	950 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	LHX3	Q9UBR4	397 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	IGSF10	Q6WRI0	2623 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293	PTPRB	P23467	1997 aa		18.3	■□□□□ 0.52
HDAC7-213	ENST00000440293		A0A1B0GTQ1	180 aa		18.29	■□□□□ 0.52
HDAC7-213	ENST00000440293	C3orf70	A6NLC5	250 aa	Predicted RBP	18.29	■□□□□ 0.52
HDAC7-213	ENST00000440293		H0Y8X5	98 aa		18.29	■□□□□ 0.52
HDAC7-213	ENST00000440293	RNF103	O00237	685 aa		18.29	■□□□□ 0.52
HDAC7-213	ENST00000440293	PSTPIP1	O43586	416 aa		18.29	■□□□□ 0.52
HDAC7-213	ENST00000440293	PLRG1	O43660	514 aa	Known RBP	18.29	■□□□□ 0.52
HDAC7-213	ENST00000440293	MAFK	O60675	156 aa		18.29	■□□□□ 0.52
HDAC7-213	ENST00000440293	ITGB7	P26010	798 aa		18.29	■□□□□ 0.52
HDAC7-213	ENST00000440293	GK	P32189	559 aa		18.29	■□□□□ 0.52
HDAC7-213	ENST00000440293	CSNK1D	P48730	415 aa		18.29	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms