RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 HGSNATQ68CP4 663 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 CCNI2Q6ZMN8 369 aaPredicted RBP20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 TMPRSS7Q7RTY8 843 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 WRAP53Q9BUR4 548 aaKnown RBP20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 NUP85Q9BW27 656 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 THAP2Q9H0W7 228 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 PDFQ9HBH1 243 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 IP6K2Q9UHH9 426 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 MFHAS1Q9Y4C4 1052 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 PCDHGA1Q9Y5H4 931 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 CFAP47Q6ZTR5 3102 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 LRRK1Q38SD2 2015 aa20.09■□□□□ 0.81
SHROOM1-204ENST00000440118 ASPMQ8IZT6 3477 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 RAD51BO15315 384 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 INSIG1O15503 277 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 CBFA2T2O43439 604 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 TM7SF2O76062 418 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 GYPCP04921 128 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 CDK4P11802 303 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 THOP1P52888 689 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 PDE1CQ14123 709 aaPredicted RBP20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 CYTH1Q15438 398 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 ERAP2Q6P179 960 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 PARGQ86W56 976 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 SLC22A18ASQ8N1D0 253 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 DENND6BQ8NEG7 585 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 XPO4Q9C0E2 1151 aaKnown RBP20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 CWC15Q9P013 229 aaKnown RBP20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 DKK3Q9UBP4 350 aa20.08■□□□□ 0.81
SHROOM1-204ENST00000440118 FAM149AA5PLN7 773 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 POM121BA6NF01 834 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 NEMP2A6NFY4 417 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 MMP20O60882 483 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 DKK1O94907 266 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 TPM1P09493 284 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 DGKAP23743 735 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 SERPINA4P29622 427 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 CASP14P31944 242 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 SUOXP51687 545 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 KRT81Q14533 505 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 BOLA3Q53S33 107 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 ZNF542PQ5EBM4 170 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 CCDC122Q5T0U0 273 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 ALKBH5Q6P6C2 394 aaKnown RBP20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 TMCO3Q6UWJ1 677 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 LZTR1Q8N653 840 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 NPWQ8N729 165 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 C1QTNF2Q9BXJ5 285 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 CPEB1Q9BZB8 566 aaKnown RBP20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 DEF6Q9H4E7 631 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 CCDC86Q9H6F5 360 aaKnown RBP20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 ATP13A3Q9H7F0 1226 aa20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 ANKRD11Q6UB99 2663 aaPredicted RBP20.07■□□□□ 0.8
SHROOM1-204ENST00000440118 A0A087X0T9 212 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 AREL1O15033 823 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 SIGLEC6O43699 453 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 PIAS2O75928 621 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 C1SP09871 688 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 FAM228BP0C875 321 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 CKMT2P17540 419 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 GJC1P36383 396 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 HCAR3P49019 387 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 ACADVLP49748 655 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 HNRNPKP61978 463 aaKnown RBP eCLIP20.06■□□□□ 0.82e-6■■■■□ 21.1
SHROOM1-204ENST00000440118 IL10RBQ08334 325 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 DPYSQ14117 519 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 ZNF235Q14590 738 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 RFTN1Q14699 578 aaPredicted RBP20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 DPYSL2Q16555 572 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 BRAT1Q6PJG6 821 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 CYP4V2Q6ZWL3 525 aaPredicted RBP20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 IFT43Q96FT9 208 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 BTBD6Q96KE9 485 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 ZNF641Q96N77 438 aaPredicted RBP20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 LENG8Q96PV6 779 aaPredicted RBP20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 TUBGCP5Q96RT8 1024 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 SUV39H2Q9H5I1 410 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 EVA1BQ9NVM1 165 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 CHD6Q8TD26 2715 aa20.06■□□□□ 0.8
SHROOM1-204ENST00000440118 ACACAQ13085 2346 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 MYO1FO00160 1098 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 SPINT1O43278 529 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 TIMP2P16035 220 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 IL1R2P27930 398 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 SERPINB6P35237 376 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 ZNF211Q13398 564 aaPredicted RBP20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 TRIM14Q14142 442 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 PTK2BQ14289 1009 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 HADHQ16836 314 aaKnown RBP20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 TSR1Q2NL82 804 aaKnown RBP20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 TMCO4Q5TGY1 634 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 ARHGAP36Q6ZRI8 547 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 KANSL1Q7Z3B3 1105 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 SRLQ86TD4 932 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 ARHGAP12Q8IWW6 846 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 BBS5Q8N3I7 341 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 ATPAF2Q8N5M1 289 aa20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 TSEN2Q8NCE0 465 aaKnown RBP20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 ZNF564Q8TBZ8 553 aaPredicted RBP20.05■□□□□ 0.8
SHROOM1-204ENST00000440118 NSMCE1Q8WV22 266 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms