RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 RHOT1Q8IXI2 618 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 NPWQ8N729 165 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 NETO2Q8NC67 525 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 TSEN2Q8NCE0 465 aaKnown RBP10.59□□□□□ -0.71
MCF2L-216ENST00000439475 EXOC2Q96KP1 924 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 CALR3Q96L12 384 aaKnown RBP10.59□□□□□ -0.71
MCF2L-216ENST00000439475 ZNF830Q96NB3 372 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-216ENST00000439475 PSKH2Q96QS6 385 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 PANX2Q96RD6 677 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 CDC6Q99741 560 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 IL21RQ9HBE5 538 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 DDX56Q9NY93 547 aaKnown RBP10.59□□□□□ -0.71
MCF2L-216ENST00000439475 EPN1Q9Y6I3 576 aaPredicted RBP10.59□□□□□ -0.71
MCF2L-216ENST00000439475 SLCO1B1Q9Y6L6 691 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 PLXNA2O75051 1894 aa10.59□□□□□ -0.71
MCF2L-216ENST00000439475 DOCK9Q9BZ29 2069 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 H0Y8X5 98 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 RNF103O00237 685 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 KCNK3O14649 394 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 FPGTO14772 594 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 INSIG1O15503 277 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 SPOPO43791 374 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 PCDHGA12O60330 932 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 MAFKO60675 156 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 TRIM16O95361 564 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 LCA5LO95447 670 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 WNT1P04628 370 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 THEGLP0DJG4 465 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 TIMP2P16035 220 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 ZFXP17010 805 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-216ENST00000439475 IL4RP24394 825 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 ABL2P42684 1182 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 GRK6P43250 576 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 RXRGP48443 463 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 ARSEP51690 589 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 NXPH1P58417 271 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 TAS2R40P59535 323 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 AP1S1P61966 158 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 MMRN1Q13201 1228 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 DPYSL3Q14195 570 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 TRIP6Q15654 476 aaKnown RBP10.58□□□□□ -0.72
MCF2L-216ENST00000439475 IFI16Q16666 785 aaKnown RBP10.58□□□□□ -0.72
MCF2L-216ENST00000439475 UGP2Q16851 508 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 HS1BP3Q53T59 392 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 ANKRD20A8PQ5CZ79 823 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 RALGPS1Q5JS13 557 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 LRRC38Q5VT99 294 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 SEL1L3Q68CR1 1132 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 LAYNQ6UX15 382 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 DBX2Q6ZNG2 339 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 VSIG1Q86XK7 387 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 NDUFAF2Q8N183 169 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 TXLNBQ8N3L3 684 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 DENND6BQ8NEG7 585 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 TSC1Q92574 1164 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 LENG8Q96PV6 779 aaPredicted RBP10.58□□□□□ -0.72
MCF2L-216ENST00000439475 SCUBE2Q9NQ36 999 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 ETNK2Q9NVF9 386 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 IMPACTQ9P2X3 320 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 ZFR2Q9UPR6 939 aaKnown RBP10.58□□□□□ -0.72
MCF2L-216ENST00000439475 FNDC3AQ9Y2H6 1198 aaKnown RBP10.58□□□□□ -0.72
MCF2L-216ENST00000439475 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.58□□□□□ -0.72
MCF2L-216ENST00000439475 PCDHA13Q9Y5I0 950 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 DMDP11532 3685 aa10.58□□□□□ -0.72
MCF2L-216ENST00000439475 A0A0A6YYK5 440 aaPredicted RBP10.57□□□□□ -0.72
MCF2L-216ENST00000439475 LRRD1A4D1F6 860 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 CFAP69A5D8W1 941 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 IGLON5A6NGN9 336 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 A6NNZ2 444 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 ZNF487B1APH4 448 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 TOR1BO14657 336 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 WNT9AO14904 365 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 GIPC1O14908 333 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 AREL1O15033 823 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 PIGNO95427 931 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 CD48P09326 243 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 KRT10P13645 584 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 TNNT1P13805 278 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 PRLRP16471 622 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 CES1P23141 567 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 CCNCP24863 283 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 MMP13P45452 471 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 RABIFP47224 123 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 HADHBP55084 474 aaKnown RBP10.57□□□□□ -0.72
MCF2L-216ENST00000439475 NAP1L1P55209 391 aaKnown RBP10.57□□□□□ -0.72
MCF2L-216ENST00000439475 SIM1P81133 766 aaPredicted RBP10.57□□□□□ -0.72
MCF2L-216ENST00000439475 ITKQ08881 620 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 SLC10A7Q0GE19 358 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 TMEM52BQ4KMG9 183 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 TMEM259Q4ZIN3 620 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 NCBP2-AS2Q69YL0 99 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 ARHGAP36Q6ZRI8 547 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 BZW1Q7L1Q6 419 aaKnown RBP10.57□□□□□ -0.72
MCF2L-216ENST00000439475 GAS2L3Q86XJ1 694 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 CAMK1DQ8IU85 385 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 PCDH19Q8TAB3 1148 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 RNF157Q96PX1 679 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 NUDCD1Q96RS6 583 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 MYOCQ99972 504 aa10.57□□□□□ -0.72
MCF2L-216ENST00000439475 C1QTNF2Q9BXJ5 285 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms