RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 ATP6V0D2Q8N8Y2 350 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 ATP11CQ8NB49 1132 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 KYQ8NBH2 561 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 SLC45A3Q96JT2 553 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 HAPLN3Q96S86 360 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 PRDM8Q9NQV8 689 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.34□□□□□ -0.59
CSTF3-203ENST00000438862 SIRPGQ9P1W8 387 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 IL36AQ9UHA7 158 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 XPO7Q9UIA9 1087 aaKnown RBP11.34□□□□□ -0.59
CSTF3-203ENST00000438862 GPR34Q9UPC5 381 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 PCDHGA3Q9Y5H0 932 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 OR51B4Q9Y5P0 310 aa11.34□□□□□ -0.59
CSTF3-203ENST00000438862 A1L4Q6 167 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 IGLON5A6NGN9 336 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 O00370 1275 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 PRKCGP05129 697 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 FYNP06241 537 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 KRT13P13646 458 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 CD19P15391 556 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 GNLYP22749 145 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 L1CAMP32004 1257 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 GTF2H1P32780 548 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 UGT1A3P35503 534 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 RGS7P49802 495 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 PNOCQ13519 176 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 CAMK4Q16566 473 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 ZC3H12AQ5D1E8 599 aaKnown RBP11.33□□□□□ -0.6
CSTF3-203ENST00000438862 PHF19Q5T6S3 580 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 PMF1Q6P1K2 205 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 MACC1Q6ZN28 852 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 MAMDC2Q7Z304 686 aaPredicted RBP11.33□□□□□ -0.6
CSTF3-203ENST00000438862 SLITRK4Q8IW52 837 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 CACNA2D3Q8IZS8 1091 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 Q8N9G6 341 aaPredicted RBP11.33□□□□□ -0.6
CSTF3-203ENST00000438862 PCDH19Q8TAB3 1148 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 CENPTQ96BT3 561 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 HSFY1Q96LI6 401 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 PRMT1Q99873 361 aaKnown RBP11.33□□□□□ -0.6
CSTF3-203ENST00000438862 EFHD1Q9BUP0 239 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 C2orf49Q9BVC5 232 aaPredicted RBP11.33□□□□□ -0.6
CSTF3-203ENST00000438862 TRIM62Q9BVG3 475 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 EDEM3Q9BZQ6 932 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 BLZF1Q9H2G9 400 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 KCTD10Q9H3F6 313 aa11.33□□□□□ -0.6
CSTF3-203ENST00000438862 PNMA8BQ9ULN7 279 aaPredicted RBP11.33□□□□□ -0.6
CSTF3-203ENST00000438862 EFCAB7A8K855 629 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 AGRPO00253 132 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 PIK3R2O00459 728 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 HGSO14964 777 aaPredicted RBP11.32□□□□□ -0.6
CSTF3-203ENST00000438862 NKX2-8O15522 239 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 SART1O43290 800 aaKnown RBP11.32□□□□□ -0.6
CSTF3-203ENST00000438862 CALUO43852 315 aaPredicted RBP11.32□□□□□ -0.6
CSTF3-203ENST00000438862 LEFTY1O75610 366 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 MT-CO1P00395 513 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 TRIM49P0CI25 452 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 TRIM49CP0CI26 452 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 SLC2A3P11169 496 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 EIF4A3P38919 411 aaKnown RBP11.32□□□□□ -0.6
CSTF3-203ENST00000438862 UQCRFS1P47985 274 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 HK3P52790 923 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 YWHAEP62258 255 aaKnown RBP11.32□□□□□ -0.6
CSTF3-203ENST00000438862 C16orf72Q14CZ0 275 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 ZNF658Q5TYW1 1059 aaPredicted RBP11.32□□□□□ -0.6
CSTF3-203ENST00000438862 TCTN3Q6NUS6 607 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 LCLAT1Q6UWP7 414 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 TRIM46Q7Z4K8 759 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 PIM3Q86V86 326 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 CIR1Q86X95 450 aaPredicted RBP11.32□□□□□ -0.6
CSTF3-203ENST00000438862 GRAMD1CQ8IYS0 662 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 CHST14Q8NCH0 376 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 FBXL13Q8NEE6 735 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 CCDC112Q8NEF3 446 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 GPR156Q8NFN8 814 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 GRIN3AQ8TCU5 1115 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 CLEC4CQ8WTT0 213 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 RAB7BQ96AH8 199 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 MMRN2Q9H8L6 949 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 EXOC1Q9NV70 894 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 RAB20Q9NX57 234 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 TBC1D30Q9Y2I9 924 aa11.32□□□□□ -0.6
CSTF3-203ENST00000438862 RP1L1Q8IWN7 2480 aaPredicted RBP11.32□□□□□ -0.6
CSTF3-203ENST00000438862 TMEM110-MUSTN1A8MSY1 372 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 RNF103O00237 685 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 NEMP1O14524 444 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 SEMA7AO75326 666 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 CLDN11O75508 207 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 CELA2BP08218 269 aaPredicted RBP11.31□□□□□ -0.6
CSTF3-203ENST00000438862 CCL4P13236 92 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 COL8A1P27658 744 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 PEX5P50542 639 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 MCCD1P59942 119 aaPredicted RBP11.31□□□□□ -0.6
CSTF3-203ENST00000438862 MC1RQ01726 317 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 CENPCQ03188 943 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 CDC20Q12834 499 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 STK4Q13043 487 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 MTA1Q13330 715 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 ARHGEF7Q14155 803 aa11.31□□□□□ -0.6
CSTF3-203ENST00000438862 CLPPQ16740 277 aaPredicted RBP11.31□□□□□ -0.6
CSTF3-203ENST00000438862 CRTC2Q53ET0 693 aaPredicted RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms