RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 PSKH2Q96QS6 385 aa25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 SUV39H2Q9H5I1 410 aa25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 ATP13A3Q9H7F0 1226 aa25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 ERVMER34-1Q9H9K5 563 aa25.02■■□□□ 1.6
RAPGEF1-206ENST00000438647 CABIN1Q9Y6J0 2220 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 A0A1B0GTQ1 180 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 KCNK3O14649 394 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 AREL1O15033 823 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 PCDHGA12O60330 932 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 SERPINA4P29622 427 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 CYLC1P35663 651 aaPredicted RBP25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 HSPA9P38646 679 aaKnown RBP25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 MAGEA1P43355 309 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 ARRB1P49407 418 aaPredicted RBP25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 SGCGQ13326 291 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 ZNF235Q14590 738 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 TCEAL1Q15170 157 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 SPA17Q15506 151 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 INAVAQ3KP66 663 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 BRAT1Q6PJG6 821 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 DBX2Q6ZNG2 339 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 SRLQ86TD4 932 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 GAS2L3Q86XJ1 694 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 KLHDC7BQ96G42 594 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 PANX2Q96RD6 677 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 TRPM6Q9BX84 2022 aa25.01■■□□□ 1.59
RAPGEF1-206ENST00000438647 MAFKO60675 156 aa25■■□□□ 1.59
RAPGEF1-206ENST00000438647 PIGNO95427 931 aa25■■□□□ 1.59
RAPGEF1-206ENST00000438647 SLC1A1P43005 524 aa25■■□□□ 1.59
RAPGEF1-206ENST00000438647 SIM1P81133 766 aaPredicted RBP25■■□□□ 1.59
RAPGEF1-206ENST00000438647 ELP6Q0PNE2 266 aa25■■□□□ 1.59
RAPGEF1-206ENST00000438647 ANKRD20A8PQ5CZ79 823 aa25■■□□□ 1.59
RAPGEF1-206ENST00000438647 MYOCQ99972 504 aa25■■□□□ 1.59
RAPGEF1-206ENST00000438647 FZD3Q9NPG1 666 aa25■■□□□ 1.59
RAPGEF1-206ENST00000438647 KLHL11Q9NVR0 708 aa25■■□□□ 1.59
RAPGEF1-206ENST00000438647 TSPAN11A1L157 253 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 LCA5LO95447 670 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 TIMP2P16035 220 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 GRK6P43250 576 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 RGRP47804 291 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 AP1S1P61966 158 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 SLC10A7Q0GE19 358 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 PAFAH1B3Q15102 231 aaKnown RBP24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 PCDH19Q8TAB3 1148 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 CXorf40AQ8TE69 158 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 ASB12Q8WXK4 309 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 FAF2Q96CS3 445 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 CAMK1GQ96NX5 476 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 PCOLCE2Q9UKZ9 415 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 ITM2BQ9Y287 266 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 HS3ST3A1Q9Y663 406 aa24.99■■□□□ 1.59
RAPGEF1-206ENST00000438647 TMEM131Q92545 1883 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 IGLON5A6NGN9 336 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 PAK4O96013 591 aaPredicted RBP24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 THEGLP0DJG4 465 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 PMLP29590 882 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 SCNN1BP51168 640 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 BCL2L1Q07817 233 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 TRIP6Q15654 476 aaKnown RBP24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 UGP2Q16851 508 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 LRRC38Q5VT99 294 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 NCBP2-AS2Q69YL0 99 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 ERAP2Q6P179 960 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 CAMK1DQ8IU85 385 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 PAF1Q8N7H5 531 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 DENND6BQ8NEG7 585 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 LENG8Q96PV6 779 aaPredicted RBP24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 CDC6Q99741 560 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 C1QTNF7Q9BXJ2 289 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 C1QTNF2Q9BXJ5 285 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 CA5BQ9Y2D0 317 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 DOCK9Q9BZ29 2069 aa24.98■■□□□ 1.59
RAPGEF1-206ENST00000438647 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 SPAARA0A1B0GVQ0 90 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 A6NNZ2 444 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 SPINT1O43278 529 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 MFSD11O43934 449 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 CBFA2T3O75081 653 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 IPO7O95373 1038 aaKnown RBP24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 PEX11BO96011 259 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 KDELR1P24390 212 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 RXRGP48443 463 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 IL9RQ01113 521 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 GALNT2Q10471 571 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 ODF2Q5BJF6 829 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 LRRC73Q5JTD7 316 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 PRAMEF14Q5SWL7 426 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 MARC1Q5VT66 337 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 ABI3BPQ7Z7G0 1075 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 VSIG1Q86XK7 387 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 TMTC1Q8IUR5 882 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 RHBDD1Q8TEB9 315 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 GGT7Q9UJ14 662 aa24.97■■□□□ 1.59
RAPGEF1-206ENST00000438647 LRRD1A4D1F6 860 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 ZNF487B1APH4 448 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 MUSKO15146 869 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 BUB1BO60566 1050 aaPredicted RBP24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 TM7SF2O76062 418 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 MX2P20592 715 aa24.96■■□□□ 1.59
RAPGEF1-206ENST00000438647 GARSP41250 739 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms