RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 SMIM30A4D0T7 59 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 NCF1BA6NI72 391 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 SLC9B1P1A6NJY1 282 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 ENO4A6NNW6 628 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 NCF1CA8MVU1 366 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM171A2A8MVW0 826 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 TMEM233B4DJY2 109 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 EBAG9O00559 213 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 CTDSP2O14595 271 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 TSPAN4O14817 238 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 PPEF2O14830 753 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 TO15178 435 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 BCAT2O15382 392 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 PRPF4O43172 522 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 SMAD6O43541 496 aaKnown RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 LPXNO60711 386 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 APOL3O95236 402 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 YEATS4O95619 227 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 PTBP3O95758 552 aaKnown RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 PDGFBP01127 241 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 S100A9P06702 114 aaKnown RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 GYPEP15421 78 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 PRLRP16471 622 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 AGAP20933 346 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 GALP22466 123 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 MCM3P25205 808 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 KLRC1P26715 233 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 IL1R2P27930 398 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 VPS41P49754 854 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 PEX5P50542 639 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 METAP1P53582 386 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 CDH8P55286 799 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 NPEPPSP55786 919 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 ANTXR2P58335 489 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 HAND2P61296 217 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 ADAM8P78325 824 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 TLE1Q04724 770 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 PPARAQ07869 468 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 TUBB3Q13509 450 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 DOC2AQ14183 400 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 CRYMQ14894 314 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 NOMO1Q15155 1222 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 CNGA3Q16281 694 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 HADHQ16836 314 aaKnown RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 INSCQ1MX18 579 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 HYAL4Q2M3T9 481 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 LEXMQ3ZCV2 418 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 GALNTL6Q49A17 601 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 GAGE13Q4V321 117 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 FBXO48Q5FWF7 155 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZNF484Q5JVG2 852 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 COLEC12Q5KU26 742 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 C1orf185Q5T7R7 199 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 C1QL3Q5VWW1 255 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 ETFRF1Q6IPR1 90 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 FBXO42Q6P3S6 717 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 KLC3Q6P597 504 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 ARMCX2Q7L311 632 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 HOOK3Q86VS8 718 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 SPATA24Q86W54 205 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 FAM90A1Q86YD7 464 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 WDR49Q8IV35 697 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 P3H2Q8IVL5 708 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 ATAD1Q8NBU5 361 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 PLA2G15Q8NCC3 412 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 NEK11Q8NG66 645 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 OR5AN1Q8NGI8 311 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 OR14C36Q8NHC7 312 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZCCHC10Q8TBK6 192 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 CAVIN3Q969G5 261 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 FOXRED1Q96CU9 486 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 TUBA1CQ9BQE3 449 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 MMTAG2Q9BU76 263 aaKnown RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 EDEM2Q9BV94 578 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 CACNG6Q9BXT2 260 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 PUS3Q9BZE2 481 aaKnown RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 TTYH1Q9H313 450 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 WDCPQ9H6R7 721 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 KAT14Q9H8E8 782 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 COQ10BQ9H8M1 238 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 VEZTQ9HBM0 779 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 RPRD1BQ9NQG5 326 aaKnown RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 RBM12Q9NTZ6 932 aaKnown RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 TDP1Q9NUW8 608 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 ZNF70Q9UC06 446 aaPredicted RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 MALT1Q9UDY8 824 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 DNAI1Q9UI46 699 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 MID2Q9UJV3 735 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 ANAPC2Q9UJX6 822 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 INTS6Q9UL03 887 aaKnown RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 PADI1Q9ULC6 663 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 CA14Q9ULX7 337 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 AGAP1Q9UPQ3 857 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 PTRH2Q9Y3E5 179 aaKnown RBP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 TEX264Q9Y6I9 313 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 COL4A3Q01955 1670 aa3.73□□□□□ -1.81
HMGB1P12-201ENST00000438594 MAP3K19Q56UN5 1328 aa3.72□□□□□ -1.81
HMGB1P12-201ENST00000438594 KIF16BQ96L93 1317 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms