RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 Q6ZTK2 550 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 MOB3CQ70IA8 216 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 R3HCC1LQ7Z5L2 792 aaKnown RBP3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 DENND6AQ8IWF6 608 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 CADM3Q8N126 398 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 PELI3Q8N2H9 469 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 PLD5Q8N7P1 536 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 NSMCE1Q8WV22 266 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 KIF1BPQ96EK5 621 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 MPHOSPH8Q99549 860 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 MVB12BQ9H7P6 319 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 PLAC1Q9HBJ0 212 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 CAMK2AQ9UQM7 478 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 RAI2Q9Y5P3 530 aa3.86□□□□□ -1.79
TRAPPC13-204ENST00000438419 ITIH6Q6UXX5 1313 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 A0A1W2PPH5 198 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 TYW5A2RUC4 315 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 VWA5AO00534 786 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 TNFRSF13BO14836 293 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 SPRY3O43610 288 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 BAIAP3O94812 1187 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 GALTP07902 379 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 MAN1A1P33908 653 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 POLGP54098 1239 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 FOXG1P55316 489 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 ROR2Q01974 943 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 FOXD4Q12950 439 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 PTP4A2Q12974 167 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 RUNX2Q13950 521 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 KRT32Q14532 448 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 TAF11Q15544 211 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 TSTQ16762 297 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 DCAF6Q58WW2 860 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 DNTTIP2Q5QJE6 756 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 GPATCH4Q5T3I0 446 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 HAUS3Q68CZ6 603 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 INO80CQ6PI98 192 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 CTU1Q7Z7A3 348 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 PCGF5Q86SE9 256 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 TBC1D26Q86UD7 250 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 RFFLQ8WZ73 363 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 KLHL29Q96CT2 875 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 YME1L1Q96TA2 773 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 SF3B5Q9BWJ5 86 aaKnown RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 NPFFR1Q9GZQ6 430 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 SLC25A18Q9H1K4 315 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 CDT1Q9H211 546 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 C20orf141Q9NUB4 165 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 ANKRD10Q9NXR5 420 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 ORC3Q9UBD5 711 aaPredicted RBP3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 SARDHQ9UL12 918 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 CARD8Q9Y2G2 431 aa3.85□□□□□ -1.79
TRAPPC13-204ENST00000438419 TTC3P53804 2025 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 TTC36A6NLP5 189 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 TACC1O75410 805 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 HEXAP06865 529 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 IRF1P10914 325 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 MYF6P23409 242 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 BDNFP23560 247 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 CDC25AP30304 524 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 ABCD1P33897 745 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 RYKP34925 604 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 LPIN1Q14693 890 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 VEPH1Q14D04 833 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 C4orf50Q6ZRC1 276 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 H1FNTQ75WM6 255 aaPredicted RBP3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 TRILQ7L0X0 811 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 GPAT4Q86UL3 456 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 LURAP1LQ8IV03 231 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 TDRD7Q8NHU6 1098 aaKnown RBP3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 KCNG4Q8TDN1 519 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 SAAL1Q96ER3 474 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 URB1-AS1Q96HZ7 61 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 APOLD1Q96LR9 279 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 WACQ9BTA9 647 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 BLOC1S4Q9NUP1 217 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 HIF1ANQ9NWT6 349 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 PLK2Q9NYY3 685 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 IL36RNQ9UBH0 155 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 HSPB7Q9UBY9 170 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 NDRG3Q9UGV2 375 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 FZD10Q9ULW2 581 aa3.84□□□□□ -1.79
TRAPPC13-204ENST00000438419 PRSS47A8MTI9 375 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 I6L893 689 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 CHL1O00533 1208 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 KCNAB3O43448 404 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 TNFSF14O43557 240 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 LDB2O43679 373 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 LIASO43766 372 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 ATP2C2O75185 946 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 LCATP04180 440 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 TFPIP10646 304 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 SRD5A1P18405 259 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 GABRB2P47870 512 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 CCR9P51686 369 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 ST3GAL1Q11201 340 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 CAPSQ13938 189 aa3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 HIST2H2ACQ16777 129 aaPredicted RBP3.83□□□□□ -1.8
TRAPPC13-204ENST00000438419 ZNF284Q2VY69 593 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms