RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 TTLL9Q3SXZ7 439 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 MBLAC2Q68D91 279 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 NCBP2-AS2Q69YL0 99 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 DCLRE1AQ6PJP8 1040 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 OR52K2Q8NGK3 314 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 DNAJB14Q8TBM8 379 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 UTP4Q969X6 686 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 SLC9A7Q96T83 725 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 CLPBQ9H078 707 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 UNC93B1Q9H1C4 597 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 NOL11Q9H8H0 719 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 POLR1BQ9H9Y6 1135 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 PTTG2Q9NZH5 202 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.74□□□□□ -1.334e-7■■■□□ 19.2
CSDE1-205ENST00000438362 EGFL7Q9UHF1 273 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 CRLS1Q9UJA2 301 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 PITPNM1O00562 1244 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 AZIN1O14977 448 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 BUD23O43709 281 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 RGS20O76081 388 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 NMBRP28336 390 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 SERPINB1P30740 379 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 S100A5P33763 92 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 SCNN1AP37088 669 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 SCNN1GP51170 649 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 MPP1Q00013 466 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 TRIM25Q14258 630 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 TARBP2Q15633 366 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 PLEKHG4Q58EX7 1191 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 MTX3Q5HYI7 312 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 CHADLQ6NUI6 762 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 ABRAXAS1Q6UWZ7 409 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 ZDHHC13Q8IUH4 622 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 ITFG1Q8TB96 612 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 FIG4Q92562 907 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 EZH1Q92800 747 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 HDAC10Q969S8 669 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 PRR11Q96HE9 360 aaPredicted RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 HNRNPABQ99729 332 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 TINF2Q9BSI4 451 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 HGH1Q9BTY7 390 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 POLR1EQ9GZS1 481 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 PLGRKTQ9HBL7 147 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 OLA1Q9NTK5 396 aaKnown RBP6.74□□□□□ -1.33
CSDE1-205ENST00000438362 FAM8A1Q9UBU6 413 aa6.74□□□□□ -1.33
CSDE1-205ENST00000438362 MYH14Q7Z406 1995 aaKnown RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 SLC22A2O15244 555 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 CCNT2O60583 730 aaKnown RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 SNAP91O60641 907 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 TRMUO75648 421 aaKnown RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 LRIG2O94898 1065 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 RTN3O95197 1032 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 SLC2A4P14672 509 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 LMO2P25791 158 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 FMO4P31512 558 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 DMC1Q14565 340 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 PSMD5Q16401 504 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 PHTF2Q8N3S3 785 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 SNX31Q8N9S9 440 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 FAM156AQ8NDB6 213 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 OR9Q1Q8NGQ5 310 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 SLC35F5Q8WV83 523 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 FAM120BQ96EK7 910 aaKnown RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 FCRL2Q96LA5 508 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 OR52B2Q96RD2 323 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 TSPAN18Q96SJ8 248 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 ACOX2Q99424 681 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 UGT2B28Q9BY64 529 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 SCUBE2Q9NQ36 999 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 PDLIM7Q9NR12 457 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 CATSPERZQ9NTU4 200 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 LIMD1Q9UGP4 676 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 LEF1Q9UJU2 399 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 SLC8A2Q9UPR5 921 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 TMEM247A6NEH6 219 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 BHMG1C9JSJ3 638 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 CCNFP41002 786 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 THOP1P52888 689 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 MAPK10P53779 464 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 TAS2R39P59534 338 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 MAXP61244 160 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 VAC14Q08AM6 782 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 INCA1Q0VD86 236 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 DLG1Q12959 904 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 ATP1A4Q13733 1029 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 CTXN3Q4LDR2 81 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 BRMS1LQ5PSV4 323 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 TMEM198Q66K66 360 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 KIAA0408Q6ZU52 694 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 HOMEZQ8IX15 550 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 FAM9CQ8IZT9 166 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 SPATA22Q8NHS9 363 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 PTCD2Q8WV60 388 aaKnown RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 GLMNQ92990 594 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 MYLPFQ96A32 169 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 SNX27Q96L92 541 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 TEKT5Q96M29 485 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 HOPXQ9BPY8 73 aaPredicted RBP6.73□□□□□ -1.33
CSDE1-205ENST00000438362 ADGRE3Q9BY15 652 aa6.73□□□□□ -1.33
CSDE1-205ENST00000438362 DPY30Q9C005 99 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms