RNA–Protein interactions for RNA: ENST00000434376.6

SCARF1-203, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 3,342 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-203ENST00000434376 LGI2Q8N0V4 545 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 PPHLN1Q8NEY8 458 aaKnown RBP15.73■□□□□ 0.11
SCARF1-203ENST00000434376 TBATAQ96M53 351 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 ARL5AQ9Y689 179 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 LRRC14BA6NHZ5 514 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 HNRNPRO43390 633 aaKnown RBP15.73■□□□□ 0.11
SCARF1-203ENST00000434376 ADAMTS4O75173 837 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 BMP1P13497 986 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 IDH3AP50213 366 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 ARSDP51689 593 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 SPANXN3Q5MJ09 141 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 TMPRSS6Q8IU80 811 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 ARHGAP12Q8IWW6 846 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 OR13C4Q8NGS5 318 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 SNRNP27Q8WVK2 155 aaKnown RBP15.73■□□□□ 0.11
SCARF1-203ENST00000434376 GATA6Q92908 595 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 GCNAQ96QF7 691 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 HBEGFQ99075 208 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 ALG9Q9H6U8 611 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 PNPLA8Q9NP80 782 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 IGSF9Q9P2J2 1179 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 EYSQ5T1H1 3165 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 LIN52Q52LA3 116 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 CLEC6AQ6EIG7 209 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 FBXL22Q6P050 247 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 DCLRE1AQ6PJP8 1040 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 CD300LGQ6UXG3 332 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 TMC7Q7Z402 723 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 DENND1CQ8IV53 801 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 CEP70Q8NHQ1 597 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 MPP4Q96JB8 637 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 PHF12Q96QT6 1004 aa15.73■□□□□ 0.11
SCARF1-203ENST00000434376 MAFKO60675 156 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 CCDC166P0CW27 439 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 ITGB6P18564 788 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 LIMK2P53671 638 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 GALNT2Q10471 571 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 SH2D4BQ5SQS7 431 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 NEPROQ6NW34 567 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 RNF19BQ6ZMZ0 732 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 SPATA24Q86W54 205 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 FAM81AQ8TBF8 368 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 CATSPERBQ9H7T0 1116 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 ACOT9Q9Y305 439 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 SZT2Q5T011 3432 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 ZBTB14O43829 449 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 GSRP00390 522 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 STMN1P16949 149 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 RPL9P32969 192 aaKnown RBP15.72■□□□□ 0.11
SCARF1-203ENST00000434376 TMED1Q13445 227 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 ZNF235Q14590 738 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 RTP2Q5QGT7 225 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 SNX32Q86XE0 403 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 NUP93Q8N1F7 819 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 IFT43Q96FT9 208 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 SPATA16Q9BXB7 569 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 TRIM8Q9BZR9 551 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 TLE6Q9H808 572 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 GPAMQ9HCL2 828 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 KCNK4Q9NYG8 393 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 FBXO5Q9UKT4 447 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 PTGDR2Q9Y5Y4 395 aa15.72■□□□□ 0.11
SCARF1-203ENST00000434376 ERI2A8K979 691 aaKnown RBP15.71■□□□□ 0.11
SCARF1-203ENST00000434376 TLR5O60602 858 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 TRIM13O60858 407 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 SUPT7LO94864 414 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 YWHAQP27348 245 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 PEX2P28328 305 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 PMLP29590 882 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 OR1D2P34982 312 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 CASP2P42575 452 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 SREBF2Q12772 1141 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 GRTP1Q5TC63 336 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 FRMD7Q6ZUT3 714 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 PCDH20Q8N6Y1 951 aaKnown RBP15.71■□□□□ 0.11
SCARF1-203ENST00000434376 LENG8Q96PV6 779 aaPredicted RBP15.71■□□□□ 0.11
SCARF1-203ENST00000434376 IL22Q9GZX6 179 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 TAGLN3Q9UI15 199 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 ZDHHC2Q9UIJ5 367 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 DSEQ9UL01 958 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 LOC285556D6RIA3 1793 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 A0A0G2JMZ2 1700 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 MYOCOSA0A1B0GUC4 107 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 AQP4P55087 323 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 POLD3Q15054 466 aaPredicted RBP15.71■□□□□ 0.11
SCARF1-203ENST00000434376 HDAC11Q96DB2 347 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 SORT1Q99523 831 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 GPBP1L1Q9HC44 474 aaPredicted RBP15.71■□□□□ 0.11
SCARF1-203ENST00000434376 PREBQ9HCU5 417 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 MARCH4Q9P2E8 410 aaPredicted RBP15.71■□□□□ 0.11
SCARF1-203ENST00000434376 PCDHGC4Q9Y5F7 938 aa15.71■□□□□ 0.11
SCARF1-203ENST00000434376 SIP14410 1827 aa15.71■□□□□ 0.1
SCARF1-203ENST00000434376 ANKRD33BA6NCL7 494 aa15.71■□□□□ 0.1
SCARF1-203ENST00000434376 GJB5O95377 273 aa15.71■□□□□ 0.1
SCARF1-203ENST00000434376 KCNA5P22460 613 aa15.71■□□□□ 0.1
SCARF1-203ENST00000434376 GPR158Q5T848 1215 aa15.71■□□□□ 0.1
SCARF1-203ENST00000434376 KYAT3Q6YP21 454 aaKnown RBP15.71■□□□□ 0.1
SCARF1-203ENST00000434376 MFSD6LQ8IWD5 586 aa15.71■□□□□ 0.1
SCARF1-203ENST00000434376 LINC01599Q8WXQ3 324 aa15.71■□□□□ 0.1
SCARF1-203ENST00000434376 TM6SF2Q9BZW4 377 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms