RNA–Protein interactions for RNA: ENST00000433807.5

MCF2L-215, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-215ENST00000433807 CACNA1EQ15878 2313 aa13.22□□□□□ -0.29
MCF2L-215ENST00000433807 KNL1Q8NG31 2342 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 A0A1W2PQ67 120 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 TCRBV7S2A1N4TA0A589 114 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 TSPAN11A1L157 253 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 TTC24A2A3L6 582 aaPredicted RBP13.21□□□□□ -0.29
MCF2L-215ENST00000433807 METTL12A8MUP2 240 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 SOCS5O75159 536 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 GJB3O75712 270 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 RBP3P10745 1247 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 ADRB3P13945 408 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 PTPN3P26045 913 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 DHPSP49366 369 aaPredicted RBP13.21□□□□□ -0.29
MCF2L-215ENST00000433807 SUOXP51687 545 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 LPAL2Q16609 132 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 CFAP58Q5T655 872 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 BRAT1Q6PJG6 821 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 CAMK1DQ8IU85 385 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 CNTD1Q8N815 330 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 RAB7BQ96AH8 199 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 ECHDC3Q96DC8 303 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 PBKQ96KB5 322 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 PHOX2BQ99453 314 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 VAT1Q99536 393 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 FRMD8P1Q9BZ68 369 aaPredicted RBP13.21□□□□□ -0.29
MCF2L-215ENST00000433807 PREBQ9HCU5 417 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 GMEB2Q9UKD1 530 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 TPX2Q9ULW0 747 aaKnown RBP13.21□□□□□ -0.29
MCF2L-215ENST00000433807 R3HDM2Q9Y2K5 976 aaKnown RBP13.21□□□□□ -0.29
MCF2L-215ENST00000433807 TTLL3Q9Y4R7 772 aa13.21□□□□□ -0.29
MCF2L-215ENST00000433807 BCLAF3A2AJT9 711 aaKnown RBP13.2□□□□□ -0.3
MCF2L-215ENST00000433807 FAM47DPA6NHR8 397 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 C10orf142B7Z368 130 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 TRAFD1O14545 582 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-215ENST00000433807 HTRA2O43464 458 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-215ENST00000433807 AP1G1O43747 822 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 CEP104O60308 925 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 EPN2O95208 641 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 ATP1A1P05023 1023 aaKnown RBP13.2□□□□□ -0.3
MCF2L-215ENST00000433807 SERPINF2P08697 491 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 TIMP2P16035 220 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 XPAP23025 273 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-215ENST00000433807 RBL1P28749 1068 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 CXCR5P32302 372 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 DPP6P42658 865 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 PTGER3P43115 390 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 TAS2R38P59533 333 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 GNG11P61952 73 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 DSC2Q02487 901 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 NIPAL4Q0D2K0 466 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 WASHC5Q12768 1159 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 LYSMD4Q5XG99 296 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 KIAA0895LQ68EN5 471 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 DARS2Q6PI48 645 aaKnown RBP13.2□□□□□ -0.3
MCF2L-215ENST00000433807 SLC41A1Q8IVJ1 513 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 DEFB119Q8N690 84 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 ARRDC2Q8TBH0 407 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 MAIP1Q8WWC4 291 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 TEKT5Q96M29 485 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 NSMCE3Q96MG7 304 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 HSPA12BQ96MM6 686 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 AGAP3Q96P47 875 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 FAM118BQ9BPY3 351 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 CEP41Q9BYV8 373 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 C6orf106Q9H6K1 298 aaPredicted RBP13.2□□□□□ -0.3
MCF2L-215ENST00000433807 PCDHGA5Q9Y5G8 931 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 FADS3Q9Y5Q0 445 aa13.2□□□□□ -0.3
MCF2L-215ENST00000433807 PTPRZ1P23471 2315 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-215ENST00000433807 PLXNA2O75051 1894 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 EP300Q09472 2414 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-215ENST00000433807 TBC1D3DA0A087WVF3 549 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 TBC1D3IA0A087WXS9 549 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 TBC1D3EA0A087X179 549 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 TBC1D3KA0A087X1G2 549 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 TBC1D3FA6NER0 549 aaPredicted RBP13.19□□□□□ -0.3
MCF2L-215ENST00000433807 MEI4A8MW99 385 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 UPK3BL1B0FP48 263 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 TBC1D3LB9A6J9 549 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 UPK3BL2E5RIL1 263 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 STK10O94804 968 aaKnown RBP13.19□□□□□ -0.3
MCF2L-215ENST00000433807 FGGP02679 453 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 RETP07949 1114 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 TBC1D3HP0C7X1 549 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 CA4P22748 312 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 ABL2P42684 1182 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 CCR5P51681 352 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 POLR2LP62875 67 aaKnown RBP13.19□□□□□ -0.3
MCF2L-215ENST00000433807 TRAF2Q12933 501 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 UGP2Q16851 508 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 HS1BP3Q53T59 392 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 WDR45BQ5MNZ6 344 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 SYCP2LQ5T4T6 812 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 ARMC12Q5T9G4 340 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 TBC1D3GQ6DHY5 549 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 TBC1D3CQ6IPX1 549 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 NEK5Q6P3R8 708 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 ARMCX6Q7L4S7 300 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 CYP2U1Q7Z449 544 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 TTC7BQ86TV6 843 aa13.19□□□□□ -0.3
MCF2L-215ENST00000433807 ZSCAN30Q86W11 494 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms