RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ECT2LQ008S8 904 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 OLIG2Q13516 323 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 HTR4Q13639 388 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 IHHQ14623 411 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 ARMC3Q5W041 872 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 DENND5AQ6IQ26 1287 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 IGDCC3Q8IVU1 814 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 SH2D3CQ8N5H7 860 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 TMEM105Q8N8V8 129 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 STAMBPL1Q96FJ0 436 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 FEM1CQ96JP0 617 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 PKNOX2Q96KN3 472 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 CEP44Q9C0F1 390 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 NOD2Q9HC29 1040 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 DEC1Q9P2X7 70 aa18.43■□□□□ 0.54
HMGN1-206ENST00000431390 A0A087WUV0 522 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-206ENST00000431390 LOC285095A0A1B0GVY8 99 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 TTC24A2A3L6 582 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-206ENST00000431390 K7ERQ8 282 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 ASLP04424 464 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 GDI1P31150 447 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 CTSOP43234 321 aaPredicted RBP18.42■□□□□ 0.54
HMGN1-206ENST00000431390 MAPK8P45983 427 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 NUBP1P53384 320 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 GPX6P59796 221 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 GPS2Q13227 327 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 PCSK7Q16549 785 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 GEN1Q17RS7 908 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 GRAMD4Q6IC98 578 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 ASCL5Q7RTU5 278 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 UBALD2Q8IYN6 164 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 MPP5Q8N3R9 675 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 EXOC2Q96KP1 924 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 APOL2Q9BQE5 337 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 IL22Q9GZX6 179 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 ZC3H7BQ9UGR2 993 aaKnown RBP18.42■□□□□ 0.54
HMGN1-206ENST00000431390 MAD1L1Q9Y6D9 718 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 NUMBLQ9Y6R0 609 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 AGPSO00116 658 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 TRIM24O15164 1050 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 SMAD6O43541 496 aaKnown RBP18.42■□□□□ 0.54
HMGN1-206ENST00000431390 GJB3O75712 270 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 ASGR2P07307 311 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 EIF2DP41214 584 aaKnown RBP18.42■□□□□ 0.54
HMGN1-206ENST00000431390 AP1S1P61966 158 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 CDK18Q07002 472 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 IFFO1Q0D2I5 559 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 TMEM215Q68D42 235 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 NCEH1Q6PIU2 408 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 C3orf62Q6ZUJ4 267 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 SRLQ86TD4 932 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 IFT43Q96FT9 208 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 RPL10LQ96L21 214 aaKnown RBP18.42■□□□□ 0.54
HMGN1-206ENST00000431390 RPP25Q9BUL9 199 aaKnown RBP18.42■□□□□ 0.54
HMGN1-206ENST00000431390 TMEM109Q9BVC6 243 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 VPS37BQ9H9H4 285 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 PIH1D1Q9NWS0 290 aaKnown RBP18.42■□□□□ 0.54
HMGN1-206ENST00000431390 SYBUQ9NX95 663 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 SAMD15Q9P1V8 674 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 ERVW-1Q9UQF0 538 aa18.42■□□□□ 0.54
HMGN1-206ENST00000431390 MYO15AQ9UKN7 3530 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 ZFHX2Q9C0A1 2572 aaPredicted RBP18.41■□□□□ 0.54
HMGN1-206ENST00000431390 MAGEB16A2A368 324 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 PROB1E7EW31 1015 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 ARNTLO00327 626 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 ZNF821O75541 412 aaPredicted RBP18.41■□□□□ 0.54
HMGN1-206ENST00000431390 IGSF6O95976 241 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 SHBGP04278 402 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 ATP5BP06576 529 aaKnown RBP18.41■□□□□ 0.54
HMGN1-206ENST00000431390 PGAM1P18669 254 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 HLA-DPA1P20036 260 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 SSTR1P30872 391 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 STK19P49842 368 aaPredicted RBP18.41■□□□□ 0.54
HMGN1-206ENST00000431390 STAT4Q14765 748 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 SLC1A5Q15758 541 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 ITPRIPL2Q3MIP1 535 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 STEAP4Q687X5 459 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 CASC4Q6P4E1 433 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 C22orf39Q6P5X5 142 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 CROCCP2Q86T23 111 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 PCDH20Q8N6Y1 951 aaKnown RBP18.41■□□□□ 0.54
HMGN1-206ENST00000431390 OR2W6PQ8NHA6 318 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 CCDC77Q9BR77 488 aa18.41■□□□□ 0.54
HMGN1-206ENST00000431390 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.4■□□□□ 0.54
HMGN1-206ENST00000431390 ATP9BO43861 1147 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 OPA1O60313 960 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 GSRP00390 522 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 SRPRAP08240 638 aaKnown RBP18.4■□□□□ 0.54
HMGN1-206ENST00000431390 CA4P22748 312 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 GJA4P35212 333 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 NNMTP40261 264 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 SLC6A11P48066 632 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 SNRPD1P62314 119 aaKnown RBP18.4■□□□□ 0.54
HMGN1-206ENST00000431390 FAM193AP78312 1265 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 ZNF844Q08AG5 666 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 EIF4HQ15056 248 aaKnown RBP18.4■□□□□ 0.54
HMGN1-206ENST00000431390 PREPLQ4J6C6 727 aaPredicted RBP18.4■□□□□ 0.54
HMGN1-206ENST00000431390 DGKKQ5KSL6 1271 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 CEP85LQ5SZL2 805 aa18.4■□□□□ 0.54
HMGN1-206ENST00000431390 PLPP6Q8IY26 295 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms