RNA–Protein interactions for RNA: ENST00000431373.1

DDR1-236, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 886 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-236ENST00000431373 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.8■□□□□ 0.6
DDR1-236ENST00000431373 ATXN2Q99700 1313 aaKnown RBP18.79■□□□□ 0.6
DDR1-236ENST00000431373 EP300Q09472 2414 aaPredicted RBP18.79■□□□□ 0.6
DDR1-236ENST00000431373 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.79■□□□□ 0.6
DDR1-236ENST00000431373 KCNK1O00180 336 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 GJB3O75712 270 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 TJP3O95049 919 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 HOXD12P35452 270 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 CCR5P51681 352 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 ITKQ08881 620 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 RPS6KA1Q15418 735 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 PLA2G2CQ5R387 149 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 CFAP58Q5T655 872 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 CAMK1DQ8IU85 385 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 REXO1L1PQ8IX06 675 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 HCAR2Q8TDS4 363 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 TFB1MQ8WVM0 346 aaKnown RBP18.79■□□□□ 0.6
DDR1-236ENST00000431373 DNASE2BQ8WZ79 361 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 RAB7BQ96AH8 199 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 BIRC7Q96CA5 298 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 IL12RB2Q99665 862 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 POLR1EQ9GZS1 481 aaKnown RBP18.79■□□□□ 0.6
DDR1-236ENST00000431373 NOD2Q9HC29 1040 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 PILRBQ9UKJ0 227 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 TPX2Q9ULW0 747 aaKnown RBP18.79■□□□□ 0.6
DDR1-236ENST00000431373 TRPM6Q9BX84 2022 aa18.79■□□□□ 0.6
DDR1-236ENST00000431373 DMDP11532 3685 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 TSPAN11A1L157 253 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 TTC24A2A3L6 582 aaPredicted RBP18.78■□□□□ 0.6
DDR1-236ENST00000431373 C10orf142B7Z368 130 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 AP1G1O43747 822 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 JCHAINP01591 159 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 IGHV4-34P06331 123 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 MAOBP27338 520 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 ABL2P42684 1182 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 ZBTB17Q13105 803 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 PRKD1Q15139 912 aaPredicted RBP18.78■□□□□ 0.6
DDR1-236ENST00000431373 NOMO1Q15155 1222 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 CCDC6Q16204 474 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 SEL1L2Q5TEA6 688 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 PEAR1Q5VY43 1037 aaPredicted RBP18.78■□□□□ 0.6
DDR1-236ENST00000431373 ALG1LQ6GMV1 187 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 NEK5Q6P3R8 708 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 B4GALNT4Q76KP1 1039 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 VPS45Q9NRW7 570 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 TMEM74BQ9NUR3 256 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 SEPT10Q9P0V9 454 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 EIF2B4Q9UI10 523 aaKnown RBP18.78■□□□□ 0.6
DDR1-236ENST00000431373 ATP8A1Q9Y2Q0 1164 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 FADS3Q9Y5Q0 445 aa18.78■□□□□ 0.6
DDR1-236ENST00000431373 PIEZO1Q92508 2521 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 GOLGA6L9A6NEM1 432 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 HACD1B0YJ81 288 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 SOCS5O75159 536 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 HLA-DQB2P05538 268 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 CES1P23141 567 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 PPP2CBP62714 309 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 PPP2CAP67775 309 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 OTUD4Q01804 1114 aaKnown RBP18.77■□□□□ 0.6
DDR1-236ENST00000431373 XRCC4Q13426 336 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 CSRP2Q16527 193 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 BRAT1Q6PJG6 821 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 RABEPKQ7Z6M1 372 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 TTC7BQ86TV6 843 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 ZC3H18Q86VM9 953 aaKnown RBP18.77■□□□□ 0.6
DDR1-236ENST00000431373 TRIM69Q86WT6 500 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 GPR161Q8N6U8 529 aaKnown RBP18.77■□□□□ 0.6
DDR1-236ENST00000431373 PAF1Q8N7H5 531 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 ACTL9Q8TC94 416 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 NSMCE3Q96MG7 304 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 QKIQ96PU8 341 aaKnown RBP eCLIP18.77■□□□□ 0.6
DDR1-236ENST00000431373 SEMA3CQ99985 751 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 MIR1-1HGQ9H1L0 117 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 PARD6AQ9NPB6 346 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 SEMA4GQ9NTN9 838 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 SUSD2Q9UGT4 822 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 TTLL3Q9Y4R7 772 aa18.77■□□□□ 0.6
DDR1-236ENST00000431373 ZNF292O60281 2723 aa18.77■□□□□ 0.59
DDR1-236ENST00000431373 LRRK1Q38SD2 2015 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 TP53BP1Q12888 1972 aaPredicted RBP18.76■□□□□ 0.59
DDR1-236ENST00000431373 TRAFD1O14545 582 aaPredicted RBP18.76■□□□□ 0.59
DDR1-236ENST00000431373 MTSS1O43312 755 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 RNGTTO60942 597 aaKnown RBP18.76■□□□□ 0.59
DDR1-236ENST00000431373 PCDH8O95206 1070 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 ZNF806P0C7X5 589 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 GNSP15586 552 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 TIMP2P16035 220 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 XPAP23025 273 aaPredicted RBP18.76■□□□□ 0.59
DDR1-236ENST00000431373 CD27P26842 260 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 SUOXP51687 545 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 DSC2Q02487 901 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 SLC45A4Q5BKX6 768 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 CEP76Q8TAP6 659 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 ECHDC3Q96DC8 303 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 CARD9Q9H257 536 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 SMOC1Q9H4F8 434 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 TRMT1Q9NXH9 659 aaKnown RBP18.76■□□□□ 0.59
DDR1-236ENST00000431373 PCDHGC4Q9Y5F7 938 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 ADAMTS9Q9P2N4 1935 aa18.76■□□□□ 0.59
DDR1-236ENST00000431373 USP34Q70CQ2 3546 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms