RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 MTRF1O75570 445 aaKnown RBP6.24□□□□□ -1.41
CHD8-202ENST00000430710 ECDO95905 644 aaPredicted RBP6.24□□□□□ -1.41
CHD8-202ENST00000430710 PCNAP12004 261 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 EPHA3P29320 983 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 MMP14P50281 582 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 MARSP56192 900 aaKnown RBP6.24□□□□□ -1.41
CHD8-202ENST00000430710 PTSQ03393 145 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 SCRN3Q0VDG4 424 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 PRKG2Q13237 762 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 CAMK2GQ13555 558 aaPredicted RBP6.24□□□□□ -1.41
CHD8-202ENST00000430710 GNASQ5JWF2 1037 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 ERICH5Q6P6B1 374 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 RBM12BQ8IXT5 1001 aaKnown RBP6.24□□□□□ -1.41
CHD8-202ENST00000430710 CLPTM1LQ96KA5 538 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 TRMOQ9BU70 441 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 LRRC42Q9Y546 428 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.24□□□□□ -1.41
CHD8-202ENST00000430710 TCRBV5S4A2TA0A5A2 114 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 GSAPA4D1B5 854 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 E7ENX8 843 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 DDX3YO15523 660 aaKnown RBP6.24□□□□□ -1.41
CHD8-202ENST00000430710 LTFP02788 710 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 SLC11A2P49281 568 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 SMIM11AP58511 58 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 RAB10P61026 200 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 ZNF177Q13360 481 aaPredicted RBP6.24□□□□□ -1.41
CHD8-202ENST00000430710 SLC1A5Q15758 541 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 FNBP1LQ5T0N5 605 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 CCNYL2Q5T2Q4 361 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 KLHDC10Q6PID8 442 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 FAM131AQ6UXB0 335 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 FAM136AQ96C01 138 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 SLC47A1Q96FL8 570 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 CMTM6Q9NX76 183 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 DDX43Q9NXZ2 648 aaKnown RBP6.24□□□□□ -1.41
CHD8-202ENST00000430710 ZNF224Q9NZL3 707 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 DGKBQ9Y6T7 804 aa6.24□□□□□ -1.41
CHD8-202ENST00000430710 CYP2A7P20853 494 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 NOS3P29474 1203 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 MARCKSL1P49006 195 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 MARC1Q5VT66 337 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 FRMD7Q6ZUT3 714 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 SLC41A1Q8IVJ1 513 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 HELQQ8TDG4 1101 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 PPP3R2Q96LZ3 170 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 ZNF512Q96ME7 567 aaPredicted RBP6.23□□□□□ -1.41
CHD8-202ENST00000430710 VPS35Q96QK1 796 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 NPAS2Q99743 824 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 UNKQ9C0B0 810 aaKnown RBP6.23□□□□□ -1.41
CHD8-202ENST00000430710 CRISPLD1Q9H336 500 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 HMX1Q9NP08 348 aaPredicted RBP6.23□□□□□ -1.41
CHD8-202ENST00000430710 TRPC4Q9UBN4 977 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 PHF11Q9UIL8 331 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 TSPAN16Q9UKR8 245 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 SAMHD1Q9Y3Z3 626 aaKnown RBP6.23□□□□□ -1.41
CHD8-202ENST00000430710 COL3A1P02461 1466 aaPredicted RBP6.23□□□□□ -1.41
CHD8-202ENST00000430710 F5H5T6 163 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 EPHB6O15197 1021 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 LGR5O75473 907 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 FYNP06241 537 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 SERPINF2P08697 491 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 AMPD1P23109 780 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 MYL9P24844 172 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 GPR15P49685 360 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 ECT2LQ008S8 904 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 MED22Q15528 200 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 ACSBG2Q5FVE4 666 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 BBS12Q6ZW61 710 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 TMEM110Q86TL2 294 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 RGL4Q8IZJ4 473 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 CCDC185Q8N715 623 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 WDR48Q8TAF3 677 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 SLC38A2Q96QD8 506 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 MAGEE1Q9HCI5 957 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 PRDM8Q9NQV8 689 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 PCDHGA3Q9Y5H0 932 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 PEX16Q9Y5Y5 336 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 SPACA6W5XKT8 324 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 SHPRHQ149N8 1683 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 hCG_1818297A0A087WSY0 165 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 EME2A4GXA9 379 aaPredicted RBP6.23□□□□□ -1.41
CHD8-202ENST00000430710 RRN3P2A6NIE6 340 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 F8VP50 259 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 M0QX08 132 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 KHDRBS3O75525 346 aaKnown RBP6.23□□□□□ -1.41
CHD8-202ENST00000430710 OR6B1O95007 311 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 ERBB2P04626 1255 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 IRF1P10914 325 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 MAGEA8P43361 318 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 SEPHS1P49903 392 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 ORC1Q13415 861 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 PCID2Q5JVF3 399 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 C10orf120Q5SQS8 335 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 ADGRD1Q6QNK2 874 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 UNC5AQ6ZN44 842 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 C11orf96Q7Z7L8 435 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 ARNTL2Q8WYA1 636 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 GMCL1Q96IK5 515 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 CD320Q9NPF0 282 aa6.23□□□□□ -1.41
CHD8-202ENST00000430710 TMEM138Q9NPI0 162 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms