RNA–Protein interactions for RNA: ENST00000430627.6

CDK12-201, Transcript of cyclin dependent kinase 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK12, Length 5,918 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK12-201ENST00000430627 NCOA3Q9Y6Q9 1424 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 FCHO1O14526 889 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 CYP1A1P04798 512 aaPredicted RBP13.42□□□□□ -0.26
CDK12-201ENST00000430627 SMPD1P17405 629 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 ZNF445P59923 1031 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 LINGO4Q6UY18 593 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 SYDE1Q6ZW31 735 aaPredicted RBP13.42□□□□□ -0.26
CDK12-201ENST00000430627 METTL6Q8TCB7 284 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 CD101Q93033 1021 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 TRIM9Q9C026 710 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 MRM3Q9HC36 420 aaKnown RBP13.42□□□□□ -0.26
CDK12-201ENST00000430627 SLAMF7Q9NQ25 335 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 STMN3Q9NZ72 180 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 NCANO14594 1321 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 TM9SF1O15321 606 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 CD151P48509 253 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 LRRC36Q1X8D7 754 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 CES3Q6UWW8 571 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 PPTC7Q8NI37 304 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 HLA-CQ95604 372 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 ZMAT2Q96NC0 199 aaKnown RBP13.42□□□□□ -0.26
CDK12-201ENST00000430627 PACSIN1Q9BY11 444 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 GPR88Q9GZN0 384 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 EPB41L4AQ9HCS5 686 aaPredicted RBP13.42□□□□□ -0.26
CDK12-201ENST00000430627 PREX2Q70Z35 1606 aa13.42□□□□□ -0.26
CDK12-201ENST00000430627 BIRC5O15392 142 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 ZNF862O60290 1169 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 LRATO95237 230 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 DBIP07108 87 aaKnown RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 ARL3P36405 182 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 PPP4CP60510 307 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 SCRN3Q0VDG4 424 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 UBXN11Q5T124 520 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 CFAP206Q8IYR0 622 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 MID1IP1Q9NPA3 183 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 SLC2A4RGQ9NR83 387 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 EDARQ9UNE0 448 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 RGS14O43566 566 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 CYP3A4P08684 503 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 LINGO3P0C6S8 592 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 NPR3P17342 541 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 ADSLP30566 484 aaPredicted RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 MAXP61244 160 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 IRX1P78414 480 aaPredicted RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 LYPLAL1Q5VWZ2 237 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 SLC8B1Q6J4K2 584 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 CRTC1Q6UUV9 634 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.41□□□□□ -0.26
CDK12-201ENST00000430627 BOLLQ8N9W6 283 aaKnown RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 OR56A4Q8NGH8 313 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 KCNV2Q8TDN2 545 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 TPSD1Q9BZJ3 242 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 PORCNQ9H237 461 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 OR12D3Q9UGF7 316 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 AXIN1O15169 862 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 SHMT1P34896 483 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 ETF1P62495 437 aaKnown RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 TUSC3Q13454 348 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 MEA1Q16626 185 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 FAM35AQ86V20 835 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 RNF168Q8IYW5 571 aaPredicted RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 FAM45AQ8TCE6 357 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 SLC9A6Q92581 669 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 KLRG1Q96E93 195 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 B3GALT6Q96L58 329 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 SPRTNQ9H040 489 aaPredicted RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 USP1O94782 785 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 SYNGR4O95473 234 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 HNRNPCP07910 306 aaKnown RBP eCLIP13.41□□□□□ -0.264e-6■■■□□ 15.1
CDK12-201ENST00000430627 PRG2P13727 222 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 TPP2P29144 1249 aaPredicted RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 CDC73Q6P1J9 531 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 RFWD3Q6PCD5 774 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 SPATS2Q86XZ4 545 aaKnown RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 SH3RF2Q8TEC5 729 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 MRPS26Q9BYN8 205 aaKnown RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 NXF3Q9H4D5 531 aaKnown RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 FBXL12Q9NXK8 326 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 SHROOM2Q13796 1616 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 FFAR3O14843 346 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 MUSKO15146 869 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 GPR42O15529 346 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 SLC26A4O43511 780 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 TIMM44O43615 452 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 TRUB2O95900 331 aaKnown RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 GPD2P43304 727 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 MAGEA10P43363 369 aaPredicted RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 KRR1Q13601 381 aaKnown RBP13.41□□□□□ -0.26
CDK12-201ENST00000430627 DAW1Q8N136 415 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 TRPV3Q8NET8 790 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 OR4K17Q8NGC6 315 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 ZNF671Q8TAW3 534 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 SUSD2Q9UGT4 822 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 CD207Q9UJ71 328 aa13.41□□□□□ -0.26
CDK12-201ENST00000430627 MAN2B1O00754 1011 aa13.4□□□□□ -0.26
CDK12-201ENST00000430627 ZNF23P17027 643 aa13.4□□□□□ -0.26
CDK12-201ENST00000430627 RPS15P62841 145 aaKnown RBP13.4□□□□□ -0.26
CDK12-201ENST00000430627 CDH17Q12864 832 aa13.4□□□□□ -0.26
CDK12-201ENST00000430627 MICU2Q8IYU8 434 aa13.4□□□□□ -0.26
CDK12-201ENST00000430627 EME1Q96AY2 570 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms