RNA–Protein interactions for RNA: ENST00000429440.5

CDC42BPA-206, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 2

Gene CDC42BPA, Length 2,501 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-206ENST00000429440 IFT80Q9P2H3 777 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZC3H7BQ9UGR2 993 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ENOPH1Q9UHY7 261 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 FBXO5Q9UKT4 447 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 AUP1Q9Y679 476 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 FOCADQ5VW36 1801 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PDHXO00330 501 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PDXKO00764 312 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 AIM2O14862 343 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZMPSTE24O75844 475 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 FDX1P10109 184 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PSKH1P11801 424 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PCSK2P16519 638 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ITGA2P17301 1181 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 SLC12A2P55011 1212 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 OR2B6P58173 313 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 CYP4F2P78329 520 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 MRPS5P82675 430 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 CYP4F3Q08477 520 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 MRPL28Q13084 256 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 RIN1Q13671 783 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 FAM26DQ5JW98 314 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 STXBP5Q5T5C0 1151 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ANGEL2Q5VTE6 544 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 METTL11BQ5VVY1 283 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 STEAP3Q658P3 488 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PRR5LQ6MZQ0 368 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 FAM196AQ6ZSG2 479 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 MRPL10Q7Z7H8 261 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PLCZ1Q86YW0 608 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ADGRF2Q8IZF7 708 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 SLC44A5Q8NCS7 719 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PSMA8Q8TAA3 256 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 VANGL1Q8TAA9 524 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 ENKURQ8TC29 256 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 VCPIP1Q96JH7 1222 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 LENG8Q96PV6 779 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 NOL11Q9H8H0 719 aaKnown RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 NTN4Q9HB63 628 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 GPBP1L1Q9HC44 474 aaPredicted RBP8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 MAD2L2Q9UI95 211 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 USP21Q9UK80 565 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 PACSIN3Q9UKS6 424 aa8.95□□□□□ -0.98
CDC42BPA-206ENST00000429440 SCN4AP35499 1836 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 TCRBV3S1A0A5B6 114 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 LINC00862A6NCI5 91 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 USP17L3A6NCW0 530 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 USP17L4A6NCW7 530 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 PRSS44E7EML9 344 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZNF195O14628 629 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 CALUO43852 315 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 APOA1P02647 267 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 SPNP16150 400 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 CKMT2P17540 419 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 GAP43P17677 238 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 CRHR1P34998 444 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 ARCN1P48444 511 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 ARSEP51690 589 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 MAPK12P53778 367 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 GPS1Q13098 491 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 TRIM25Q14258 630 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 CRY2Q49AN0 593 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 LGSNQ5TDP6 509 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 FAXCQ5TGI0 409 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 HMBOX1Q6NT76 420 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 USP17L1Q7RTZ2 530 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 KRT25Q7Z3Z0 450 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 MAVSQ7Z434 540 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 C11orf96Q7Z7L8 435 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 CPNE8Q86YQ8 564 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 PALM2Q8IXS6 379 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 LPGAT1Q92604 370 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 EYA3Q99504 573 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 PITHD1Q9GZP4 211 aaPredicted RBP8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 SPC25Q9HBM1 224 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 ABCB10Q9NRK6 738 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 APEX2Q9UBZ4 518 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 SLCO3A1Q9UIG8 710 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 DRG1Q9Y295 367 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 TMEM5Q9Y2B1 443 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 SNCAIPQ9Y6H5 919 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 TANC1Q9C0D5 1861 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 LRRC37AA6NMS7 1700 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 M0R3G1 203 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 ARHGEF9O43307 516 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 ZBTB14O43829 449 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 PTP4A3O75365 173 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 AKAP3O75969 853 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 SLC4A1P02730 911 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 RPS17P08708 135 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 TMEM191BP0C7N4 346 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 CYP2C18P33260 490 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 HNF1BP35680 557 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 SERPINB5P36952 375 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 ERVK-21P61565 698 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 C1QBPQ07021 282 aaKnown RBP8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 IKZF1Q13422 519 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 PON2Q15165 354 aa8.94□□□□□ -0.98
CDC42BPA-206ENST00000429440 LLGL1Q15334 1064 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms