RNA–Protein interactions for RNA: ENST00000428843.5

PTPN18-205, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 3

Gene PTPN18, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-205ENST00000428843 SUMF1Q8NBK3 374 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 SLC35B2Q8TB61 432 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 ARRDC2Q8TBH0 407 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 ATG4AQ8WYN0 398 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 OSBPL9Q96SU4 736 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 DKK3Q9UBP4 350 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 RAB23Q9ULC3 237 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 SNX12Q9UMY4 172 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 PCDHGC4Q9Y5F7 938 aa22.55■■□□□ 1.2
PTPN18-205ENST00000428843 FAM47DPA6NHR8 397 aa22.54■■□□□ 1.2
PTPN18-205ENST00000428843 TRAFD1O14545 582 aaPredicted RBP22.54■■□□□ 1.2
PTPN18-205ENST00000428843 PLRG1O43660 514 aaKnown RBP22.54■■□□□ 1.2
PTPN18-205ENST00000428843 CES1P23141 567 aa22.54■■□□□ 1.2
PTPN18-205ENST00000428843 TAS2R38P59533 333 aa22.54■■□□□ 1.2
PTPN18-205ENST00000428843 SIX1Q15475 284 aaPredicted RBP22.54■■□□□ 1.2
PTPN18-205ENST00000428843 RASGEF1CQ8N431 466 aa22.54■■□□□ 1.2
PTPN18-205ENST00000428843 HCAR2Q8TDS4 363 aa22.54■■□□□ 1.2
PTPN18-205ENST00000428843 TRIM44Q96DX7 344 aaPredicted RBP22.54■■□□□ 1.2
PTPN18-205ENST00000428843 TEKT5Q96M29 485 aa22.54■■□□□ 1.2
PTPN18-205ENST00000428843 C6orf106Q9H6K1 298 aaPredicted RBP22.54■■□□□ 1.2
PTPN18-205ENST00000428843 DNPEPQ9ULA0 475 aa22.54■■□□□ 1.2
PTPN18-205ENST00000428843 TNRC6BQ9UPQ9 1833 aaKnown RBP22.54■■□□□ 1.2
PTPN18-205ENST00000428843 TSPAN11A1L157 253 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 PROB1E7EW31 1015 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 KCNN4O15554 427 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 SOCS5O75159 536 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 TIMP2P16035 220 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 ABL2P42684 1182 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 TRAF2Q12933 501 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 IHHQ14623 411 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 LONRF2Q1L5Z9 754 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 SPDYCQ5MJ68 293 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 CFAP58Q5T655 872 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 BRAT1Q6PJG6 821 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 ZSWIM9Q86XI8 627 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 SLC41A1Q8IVJ1 513 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 ZNF567Q8N184 647 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 CADM4Q8NFZ8 388 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 OR2T34Q8NGX1 318 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 MAIP1Q8WWC4 291 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 C1orf54Q8WWF1 131 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 ECHDC3Q96DC8 303 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 MS4A14Q96JA4 679 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 VAT1Q99536 393 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 NAPGQ99747 312 aaPredicted RBP22.53■■□□□ 1.2
PTPN18-205ENST00000428843 FERMT1Q9BQL6 677 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 FRMD8P1Q9BZ68 369 aaPredicted RBP22.53■■□□□ 1.2
PTPN18-205ENST00000428843 KDM4CQ9H3R0 1056 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 USP29Q9HBJ7 922 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 GLOD4Q9HC38 313 aa22.53■■□□□ 1.2
PTPN18-205ENST00000428843 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.53■■□□□ 1.2
PTPN18-205ENST00000428843 KLHL8Q9P2G9 620 aaPredicted RBP22.53■■□□□ 1.2
PTPN18-205ENST00000428843 PRR23AA6NEV1 266 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 LRRC72A6NJI9 287 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 HTRA2O43464 458 aaPredicted RBP22.52■■□□□ 1.2
PTPN18-205ENST00000428843 LIASO43766 372 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 MMP2P08253 660 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 CD68P34810 354 aaPredicted RBP22.52■■□□□ 1.2
PTPN18-205ENST00000428843 PTGER3P43115 390 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 DHPSP49366 369 aaPredicted RBP22.52■■□□□ 1.2
PTPN18-205ENST00000428843 LRRC73Q5JTD7 316 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 ARMCX6Q7L4S7 300 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 PID1Q7Z2X4 250 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 TTC7BQ86TV6 843 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 COG1Q8WTW3 980 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 NKD2Q969F2 451 aaPredicted RBP22.52■■□□□ 1.2
PTPN18-205ENST00000428843 RAB7BQ96AH8 199 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 HSPA12BQ96MM6 686 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 PCED1AQ9H1Q7 454 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 RAI2Q9Y5P3 530 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 FADS3Q9Y5Q0 445 aa22.52■■□□□ 1.2
PTPN18-205ENST00000428843 TBC1D3DA0A087WVF3 549 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 TBC1D3IA0A087WXS9 549 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 TBC1D3EA0A087X179 549 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 TBC1D3KA0A087X1G2 549 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 TBC1D3FA6NER0 549 aaPredicted RBP22.51■■□□□ 1.19
PTPN18-205ENST00000428843 METTL12A8MUP2 240 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 TBC1D3LB9A6J9 549 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 CES2O00748 559 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 LMNAP02545 664 aaKnown RBP22.51■■□□□ 1.19
PTPN18-205ENST00000428843 SERPINF2P08697 491 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 TBC1D3HP0C7X1 549 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 CD86P42081 329 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 SKOR1P84550 965 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 KIAA0895LQ68EN5 471 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 TBC1D3GQ6DHY5 549 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 LAIR1Q6GTX8 287 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 TBC1D3CQ6IPX1 549 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 TBC1D3Q8IZP1 549 aaPredicted RBP22.51■■□□□ 1.19
PTPN18-205ENST00000428843 PAF1Q8N7H5 531 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 PDCD6IPQ8WUM4 868 aaKnown RBP22.51■■□□□ 1.19
PTPN18-205ENST00000428843 FOXJ1Q92949 421 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 IMP4Q96G21 291 aaKnown RBP22.51■■□□□ 1.19
PTPN18-205ENST00000428843 RBM15Q96T37 977 aaKnown RBP eCLIP22.51■■□□□ 1.19
PTPN18-205ENST00000428843 TMEM121Q9BTD3 319 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 SLC25A51Q9H1U9 297 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 PREBQ9HCU5 417 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 TRHDEQ9UKU6 1024 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 ZKSCAN5Q9Y2L8 839 aa22.51■■□□□ 1.19
PTPN18-205ENST00000428843 USP34Q70CQ2 3546 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms