RNA–Protein interactions for RNA: ENST00000428678.1

UPK3BP1-201, Transcript of uroplakin 3B pseudogene 1, humanhuman

BASIC

Gene UPK3BP1, Length 509 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BP1-201ENST00000428678 SNRPD1P62314 119 aaKnown RBP18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 ATXN7L2Q5T6C5 722 aaPredicted RBP18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 SMYD5Q6GMV2 418 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 TRNP1Q6NT89 227 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 RWDD4Q6NW29 188 aaKnown RBP18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 TTC7BQ86TV6 843 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 FAM71AQ8IYT1 594 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 FBXO39Q8N4B4 442 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 ARL10Q8N8L6 244 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 KYQ8NBH2 561 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 CXorf40AQ8TE69 158 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 SCG3Q8WXD2 468 aaKnown RBP18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 ARHGEF2Q92974 986 aaKnown RBP18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 CCDC74AQ96AQ1 378 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 GFM1Q96RP9 751 aaKnown RBP18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 OSBPL1AQ9BXW6 950 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 FAM117AQ9C073 453 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 NDFIP2Q9NV92 336 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 RWDD2AQ9UIY3 292 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 HPCAL4Q9UM19 191 aa18.56■□□□□ 0.56
UPK3BP1-201ENST00000428678 AREL1O15033 823 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 TM7SF2O76062 418 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 GJB6O95452 261 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 POP4O95707 220 aaKnown RBP18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 CDH5P33151 784 aaPredicted RBP18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 UGT1A5P35504 534 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 ATP11AP98196 1134 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 C1QBPQ07021 282 aaKnown RBP18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 MYLK3Q32MK0 819 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 TAF3Q5VWG9 929 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 GDPD4Q6W3E5 623 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 USP53Q70EK8 1073 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 RAB11FIP2Q7L804 512 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 HID1Q8IV36 788 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 FSTL5Q8N475 847 aaPredicted RBP18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 EXD3Q8N9H8 876 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 PCDH19Q8TAB3 1148 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 EPAS1Q99814 870 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 WRAP53Q9BUR4 548 aaKnown RBP18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 FOXP3Q9BZS1 431 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 TRIM4Q9C037 500 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 STRADBQ9C0K7 418 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 MBNL1Q9NR56 388 aaKnown RBP18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 DNAI1Q9UI46 699 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 RABGEF1Q9UJ41 708 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 PCDHGA7Q9Y5G6 932 aa18.55■□□□□ 0.56
UPK3BP1-201ENST00000428678 CXorf51AA0A1B0GTR3 108 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 TOR1BO14657 336 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 EFSO43281 561 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 CTSEP14091 401 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 MAPKAPK2P49137 400 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 BLKP51451 505 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 EIF3IQ13347 325 aaKnown RBP18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 RAPGEF1Q13905 1077 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 ELOCQ15369 112 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 KLHL40Q2TBA0 621 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 BNIPLQ7Z465 357 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 SDR16C5Q8N3Y7 309 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 TP53I13Q8NBR0 393 aaPredicted RBP18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 MSANTD4Q8NCY6 345 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 OR12D3Q9UGF7 316 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 TMEM59LQ9UK28 342 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 GPR34Q9UPC5 381 aa18.54■□□□□ 0.56
UPK3BP1-201ENST00000428678 D6RAR5 112 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 TMX2-CTNND1H3BSU7 103 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 RPLP0P05388 317 aaKnown RBP18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 ALPIP09923 528 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 HGFP14210 728 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 CYP11B1P15538 503 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 RHOQP17081 205 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 ITIH2P19823 946 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 CSRP3P50461 194 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 HK3P52790 923 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 INHBCP55103 352 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 CCL7P80098 99 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 IRF4Q15306 451 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 TGIF1Q15583 401 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 CDO1Q16878 200 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 RD3Q7Z3Z2 195 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 ZNF354CQ86Y25 554 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 IRF2BP1Q8IU81 584 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 EMC1Q8N766 993 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 TSACCQ96A04 125 aaPredicted RBP18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 VOPP1Q96AW1 172 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 SGF29Q96ES7 293 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 GDAP1L1Q96MZ0 367 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 ARHGAP9Q9BRR9 750 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 CPEB1Q9BZB8 566 aaKnown RBP18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 MAGEH1Q9H213 219 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 PISDQ9UG56 409 aa18.53■□□□□ 0.56
UPK3BP1-201ENST00000428678 RAMP2O60895 175 aa18.52■□□□□ 0.56
UPK3BP1-201ENST00000428678 TMCC1O94876 653 aa18.52■□□□□ 0.56
UPK3BP1-201ENST00000428678 LSM8O95777 96 aaKnown RBP18.52■□□□□ 0.56
UPK3BP1-201ENST00000428678 JMJD7P0C870 316 aa18.52■□□□□ 0.56
UPK3BP1-201ENST00000428678 RAD51Q06609 339 aa18.52■□□□□ 0.56
UPK3BP1-201ENST00000428678 SRSF6Q13247 344 aaKnown RBP18.52■□□□□ 0.56
UPK3BP1-201ENST00000428678 ALG11Q2TAA5 492 aa18.52■□□□□ 0.56
UPK3BP1-201ENST00000428678 LINC00303Q3SY05 128 aa18.52■□□□□ 0.56
UPK3BP1-201ENST00000428678 RAB6CQ53S08 254 aa18.52■□□□□ 0.56
UPK3BP1-201ENST00000428678 MANEALQ5VSG8 457 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms