RNA–Protein interactions for RNA: ENST00000427408.1

SSUH2-206, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 3

Gene SSUH2, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-206ENST00000427408 RTP5Q14D33 572 aa13.8□□□□□ -0.2
SSUH2-206ENST00000427408 INO80DQ53TQ3 878 aaPredicted RBP13.8□□□□□ -0.2
SSUH2-206ENST00000427408 E4F1Q66K89 784 aaPredicted RBP13.8□□□□□ -0.2
SSUH2-206ENST00000427408 ZNF548Q8NEK5 533 aaPredicted RBP13.8□□□□□ -0.2
SSUH2-206ENST00000427408 ASB12Q8WXK4 309 aa13.8□□□□□ -0.2
SSUH2-206ENST00000427408 CELF6Q96J87 481 aaKnown RBP13.8□□□□□ -0.2
SSUH2-206ENST00000427408 NRSN2Q9GZP1 204 aa13.8□□□□□ -0.2
SSUH2-206ENST00000427408 LRRC19Q9H756 370 aa13.8□□□□□ -0.2
SSUH2-206ENST00000427408 NLGN3Q9NZ94 848 aa13.8□□□□□ -0.2
SSUH2-206ENST00000427408 MFHAS1Q9Y4C4 1052 aa13.8□□□□□ -0.2
SSUH2-206ENST00000427408 PCDHB1Q9Y5F3 818 aa13.8□□□□□ -0.2
SSUH2-206ENST00000427408 LRRC53A6NM62 1247 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 BUB1BO60566 1050 aaPredicted RBP13.79□□□□□ -0.2
SSUH2-206ENST00000427408 GCATO75600 419 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 IGSF6O95976 241 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 JUNDP17535 347 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 PSMA2P25787 234 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 RAD51Q06609 339 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 PARP15Q460N3 678 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 HS1BP3Q53T59 392 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 CDCP2Q5VXM1 449 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 PLEKHA7Q6IQ23 1121 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 ZNF571Q7Z3V5 609 aaPredicted RBP13.79□□□□□ -0.2
SSUH2-206ENST00000427408 PARGQ86W56 976 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 RBFAQ8N0V3 343 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 CACTIN-AS1Q8N1I8 211 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 FAM181AQ8N9Y4 354 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 LMX1AQ8TE12 382 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 CASKIN2Q8WXE0 1202 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 NAP1L5Q96NT1 182 aaPredicted RBP13.79□□□□□ -0.2
SSUH2-206ENST00000427408 PEBP4Q96S96 227 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 KCTD15Q96SI1 283 aaPredicted RBP13.79□□□□□ -0.2
SSUH2-206ENST00000427408 WRAP53Q9BUR4 548 aaKnown RBP13.79□□□□□ -0.2
SSUH2-206ENST00000427408 CATSPERBQ9H7T0 1116 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 DKK3Q9UBP4 350 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 UBA2Q9UBT2 640 aaPredicted RBP13.79□□□□□ -0.2
SSUH2-206ENST00000427408 PCSK1NQ9UHG2 260 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 CHD5Q8TDI0 1954 aa13.79□□□□□ -0.2
SSUH2-206ENST00000427408 NEMP2A6NFY4 417 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 DDX3XO00571 662 aaKnown RBP eCLIP13.78□□□□□ -0.22e-16■■□□□ 11.5
SSUH2-206ENST00000427408 AQP9O43315 295 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 BRINP1O60477 761 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 PRAMEF11O60813 436 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 MBD3O95983 291 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 PRKCGP05129 697 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 CCDC172P0C7W6 258 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 ALPPL2P10696 532 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 PAPOLAP51003 745 aaKnown RBP13.78□□□□□ -0.2
SSUH2-206ENST00000427408 AIF1P55008 147 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 TPI1P60174 286 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 C1orf61Q13536 156 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 ASIC2Q16515 512 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 CDKN3Q16667 212 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 KLHL40Q2TBA0 621 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 DEFB133Q30KQ1 61 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 NYAP1Q6ZVC0 841 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 ZSCAN30Q86W11 494 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 TP53I13Q8NBR0 393 aaPredicted RBP13.78□□□□□ -0.2
SSUH2-206ENST00000427408 DENND6BQ8NEG7 585 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 CXorf40AQ8TE69 158 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 VCPIP1Q96JH7 1222 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 BBC3Q96PG8 261 aaPredicted RBP13.78□□□□□ -0.2
SSUH2-206ENST00000427408 CPEB1Q9BZB8 566 aaKnown RBP13.78□□□□□ -0.2
SSUH2-206ENST00000427408 SLC39A8Q9C0K1 460 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 DHX35Q9H5Z1 703 aaKnown RBP13.78□□□□□ -0.2
SSUH2-206ENST00000427408 HAUS4Q9H6D7 363 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 PDFQ9HBH1 243 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 PARVAQ9NVD7 372 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 MYO6Q9UM54 1294 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 AP4E1Q9UPM8 1137 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 COQ6Q9Y2Z9 468 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 RAI2Q9Y5P3 530 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 CFAP46Q8IYW2 2715 aa13.78□□□□□ -0.2
SSUH2-206ENST00000427408 KALRNO60229 2985 aa13.77□□□□□ -0.2
SSUH2-206ENST00000427408 CPED1A4D0V7 1026 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 TMEM191CA6NGB0 347 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 EEF2KO00418 725 aaKnown RBP13.77□□□□□ -0.21
SSUH2-206ENST00000427408 CASC3O15234 703 aaKnown RBP13.77□□□□□ -0.21
SSUH2-206ENST00000427408 FGF10O15520 208 aaPredicted RBP13.77□□□□□ -0.21
SSUH2-206ENST00000427408 TM7SF2O76062 418 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 FTLP02792 175 aaPredicted RBP13.77□□□□□ -0.21
SSUH2-206ENST00000427408 SKILP12757 684 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 MIPP30301 263 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 EIF2S3P41091 472 aaKnown RBP13.77□□□□□ -0.21
SSUH2-206ENST00000427408 RGRP47804 291 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 NDST2P52849 883 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 ADKP55263 362 aaKnown RBP13.77□□□□□ -0.21
SSUH2-206ENST00000427408 IRF4Q15306 451 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 TMEM52BQ4KMG9 183 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 ARHGAP36Q6ZRI8 547 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 CYP4V2Q6ZWL3 525 aaPredicted RBP13.77□□□□□ -0.21
SSUH2-206ENST00000427408 ZSWIM9Q86XI8 627 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 CAMK1DQ8IU85 385 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 MGAQ8IWI9 3026 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 TP53INP2Q8IXH6 220 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 IFI44Q8TCB0 444 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 ARHGEF26Q96DR7 871 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 NSMCE3Q96MG7 304 aa13.77□□□□□ -0.21
SSUH2-206ENST00000427408 SNRNP25Q9BV90 132 aaKnown RBP13.77□□□□□ -0.21
SSUH2-206ENST00000427408 DUSP23Q9BVJ7 150 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms