RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 EPC2Q52LR7 807 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 ZSCAN18Q8TBC5 510 aaPredicted RBP14.55□□□□□ -0.08
PTPN13-203ENST00000427191 PNPT1Q8TCS8 783 aaKnown RBP14.55□□□□□ -0.08
PTPN13-203ENST00000427191 RFKQ969G6 155 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 PCYOX1Q9UHG3 505 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 TSPAN16Q9UKR8 245 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 MEMO1Q9Y316 297 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 FRMPD4Q14CM0 1322 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 ADGRB3O60242 1522 aa14.55□□□□□ -0.08
PTPN13-203ENST00000427191 CCL15-CCL14A0A0B4J2E2 113 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 UGT2B17O75795 530 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 ITIH1P19827 911 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 PSMA1P25786 263 aaKnown RBP14.54□□□□□ -0.08
PTPN13-203ENST00000427191 SNRPD1P62314 119 aaKnown RBP14.54□□□□□ -0.08
PTPN13-203ENST00000427191 CCL15Q16663 113 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 STXBP5Q5T5C0 1151 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 TMIEQ8NEW7 156 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 SYT15Q9BQS2 421 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 BCORL1Q5H9F3 1711 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 GPR75-ASB3A0A0A6YYF3 556 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 TRAFD1O14545 582 aaPredicted RBP14.54□□□□□ -0.08
PTPN13-203ENST00000427191 CCNE2O96020 404 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 AKR1D1P51857 326 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 SLC6A3Q01959 620 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 ZNF571Q7Z3V5 609 aaPredicted RBP14.54□□□□□ -0.08
PTPN13-203ENST00000427191 ATCAYQ86WG3 371 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.54□□□□□ -0.08
PTPN13-203ENST00000427191 ETNPPLQ8TBG4 499 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 ANKZF1Q9H8Y5 726 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 EXD2Q9NVH0 621 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 RAB26Q9ULW5 256 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 COX4I1P13073 169 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 AMHR2Q16671 573 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 TP53INP1Q96A56 240 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 CST11Q9H112 138 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 RAP2CQ9Y3L5 183 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 CST1P01037 141 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 ZNF37AP17032 561 aaPredicted RBP14.54□□□□□ -0.08
PTPN13-203ENST00000427191 PPP4CP60510 307 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 GRB10Q13322 594 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 BMPR2Q13873 1038 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 PDK4Q16654 411 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 ATP13A5Q4VNC0 1218 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 CDC42EP5Q6NZY7 148 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 TTC7BQ86TV6 843 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 PSTKQ8IV42 348 aaKnown RBP14.54□□□□□ -0.08
PTPN13-203ENST00000427191 FAR1Q8WVX9 515 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 ALKQ9UM73 1620 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 WRBO00258 174 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 VAPBO95292 243 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 ALDH2P05091 517 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 NR2F1P10589 423 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 FDPSP14324 419 aaKnown RBP14.54□□□□□ -0.08
PTPN13-203ENST00000427191 PAX7P23759 505 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 CDH5P33151 784 aaPredicted RBP14.54□□□□□ -0.08
PTPN13-203ENST00000427191 USP41Q3LFD5 358 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 MSANTD1Q6ZTZ1 278 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 EHD4Q9H223 541 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 HMGXB4Q9UGU5 601 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 SAMHD1Q9Y3Z3 626 aaKnown RBP14.54□□□□□ -0.08
PTPN13-203ENST00000427191 H0YJX3 145 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 SCN1BQ07699 218 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 C15orf40Q8WUR7 153 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 IFT80Q9P2H3 777 aaPredicted RBP14.54□□□□□ -0.08
PTPN13-203ENST00000427191 OR10H2O60403 315 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 GJB7Q6PEY0 223 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 MREGQ8N565 214 aa14.54□□□□□ -0.08
PTPN13-203ENST00000427191 SYTL5Q8TDW5 730 aaPredicted RBP14.54□□□□□ -0.08
PTPN13-203ENST00000427191 PIGNO95427 931 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 TAS2R41P59536 307 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 PSME3P61289 254 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 VPS26BQ4G0F5 336 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 SULT1C3Q6IMI6 304 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 SLC47A1Q96FL8 570 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 RTKNQ9BST9 563 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 ELL3Q9HB65 397 aaPredicted RBP14.53□□□□□ -0.08
PTPN13-203ENST00000427191 KCND1Q9NSA2 647 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 ZNF780BQ9Y6R6 833 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 CNTNAP2Q9UHC6 1331 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 BTNL10A8MVZ5 291 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 OR5F1O95221 314 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 GSTT2BP0CG30 244 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 RPL21P46778 160 aaKnown RBP14.53□□□□□ -0.08
PTPN13-203ENST00000427191 THOP1P52888 689 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 MBTD1Q05BQ5 628 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 FSCN1Q16658 493 aaKnown RBP14.53□□□□□ -0.08
PTPN13-203ENST00000427191 PFKFB4Q16877 469 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 GPRIN3Q6ZVF9 776 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 SLC4A11Q8NBS3 891 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 SEMA6AQ9H2E6 1030 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 XPNPEP3Q9NQH7 507 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 COG5Q9UP83 839 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 A0A0G2JLW4 131 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 LTFP02788 710 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 TRMT13Q9NUP7 481 aaKnown RBP14.53□□□□□ -0.08
PTPN13-203ENST00000427191 NINJ2Q9NZG7 142 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 FAM25EA8MYX2 175 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 PLIN3O60664 434 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 AIF1P55008 147 aa14.53□□□□□ -0.08
PTPN13-203ENST00000427191 BTN3A2P78410 334 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms