RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 SLC25A45Q8N413 288 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 ZNF564Q8TBZ8 553 aaPredicted RBP12.9□□□□□ -0.34
GPC1-204ENST00000426280 FAM71BQ8TC56 605 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 KLHDC7BQ96G42 594 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 FEM1CQ96JP0 617 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 GDAP1L1Q96MZ0 367 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 C1QTNF2Q9BXJ5 285 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 MBNL1Q9NR56 388 aaKnown RBP12.9□□□□□ -0.34
GPC1-204ENST00000426280 UCKL1Q9NWZ5 548 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 IPO11Q9UI26 975 aaKnown RBP12.9□□□□□ -0.34
GPC1-204ENST00000426280 PNMA8BQ9ULN7 279 aaPredicted RBP12.9□□□□□ -0.34
GPC1-204ENST00000426280 PCDHB9Q9Y5E1 797 aa12.9□□□□□ -0.34
GPC1-204ENST00000426280 TP53BP1Q12888 1972 aaPredicted RBP12.9□□□□□ -0.34
GPC1-204ENST00000426280 ZSCAN5CA6NGD5 496 aaPredicted RBP12.89□□□□□ -0.35
GPC1-204ENST00000426280 ARHGAP42A6NI28 874 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 EIF3CLB5ME19 914 aaKnown RBP12.89□□□□□ -0.35
GPC1-204ENST00000426280 H3BRJ5 948 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 MAP3K6O95382 1288 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 IGSF6O95976 241 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 GIMD1P0DJR0 217 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 GJC1P36383 396 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 DNAJC3Q13217 504 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 Q6ZSR6 202 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 RAB44Q7Z6P3 723 aaPredicted RBP12.89□□□□□ -0.35
GPC1-204ENST00000426280 ABI3BPQ7Z7G0 1075 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 GLRX5Q86SX6 157 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 SRLQ86TD4 932 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 TMTC1Q8IUR5 882 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 EID2Q8N6I1 236 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 CASKIN2Q8WXE0 1202 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 PPP1R16AQ96I34 528 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 LRIG1Q96JA1 1093 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 EIF3CQ99613 913 aaKnown RBP12.89□□□□□ -0.35
GPC1-204ENST00000426280 BAG1Q99933 345 aaPredicted RBP12.89□□□□□ -0.35
GPC1-204ENST00000426280 WRAP53Q9BUR4 548 aaKnown RBP12.89□□□□□ -0.35
GPC1-204ENST00000426280 CPEB1Q9BZB8 566 aaKnown RBP12.89□□□□□ -0.35
GPC1-204ENST00000426280 GDF3Q9NR23 364 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 CTTNBP2NLQ9P2B4 639 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 KLF15Q9UIH9 416 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 COQ6Q9Y2Z9 468 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 EPN1Q9Y6I3 576 aaPredicted RBP12.89□□□□□ -0.35
GPC1-204ENST00000426280 KNL1Q8NG31 2342 aa12.89□□□□□ -0.35
GPC1-204ENST00000426280 TMEM110-MUSTN1A8MSY1 372 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 MYO1FO00160 1098 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 FLRT2O43155 660 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 MAFKO60675 156 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 PALMO75781 387 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 PROSCO94903 275 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 DKK1O94907 266 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 MYF5P13349 255 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 HNRNPA2B1P22626 353 aaKnown RBP12.88□□□□□ -0.35
GPC1-204ENST00000426280 EPHA8P29322 1005 aaPredicted RBP12.88□□□□□ -0.35
GPC1-204ENST00000426280 CYLC1P35663 651 aaPredicted RBP12.88□□□□□ -0.35
GPC1-204ENST00000426280 SSR1P43307 286 aaKnown RBP12.88□□□□□ -0.35
GPC1-204ENST00000426280 MAGEA1P43355 309 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 RXRGP48443 463 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 CDH6P55285 790 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 RPS21P63220 83 aaKnown RBP12.88□□□□□ -0.35
GPC1-204ENST00000426280 IL10RBQ08334 325 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 DPYSL3Q14195 570 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 GSE1Q14687 1217 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 CCDC170Q8IYT3 715 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 ACRBPQ8NEB7 543 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 PCDH19Q8TAB3 1148 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 SLC35G2Q8TBE7 412 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 TEKT4Q8WW24 435 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 CTNNBL1Q8WYA6 563 aaPredicted RBP12.88□□□□□ -0.35
GPC1-204ENST00000426280 RAPGEF5Q92565 580 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 GATA6Q92908 595 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 CENPTQ96BT3 561 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 SMIM14Q96QK8 99 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 SUV39H2Q9H5I1 410 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 ERVMER34-1Q9H9K5 563 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 GPR27Q9NS67 375 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 HYOU1Q9Y4L1 999 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 HS3ST3A1Q9Y663 406 aa12.88□□□□□ -0.35
GPC1-204ENST00000426280 SPEGQ15772 3267 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 A0A0U1RQS6 177 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 TSPAN11A1L157 253 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 A8MX80 341 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 GOLGA6L6A8MZA4 724 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 TRIM38O00635 465 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 TRAFD1O14545 582 aaPredicted RBP12.87□□□□□ -0.35
GPC1-204ENST00000426280 TSPAN6O43657 245 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 NDUFA10O95299 355 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 LCA5LO95447 670 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 ITGAVP06756 1048 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 TMEM253P0C7T8 217 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 DESP17661 470 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 GM2AP17900 193 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 CR2P20023 1033 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 AKT2P31751 481 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 IGFALSP35858 605 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 MAXP61244 160 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 SLC10A2Q12908 348 aaPredicted RBP12.87□□□□□ -0.35
GPC1-204ENST00000426280 FZD2Q14332 565 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 MESDQ14696 234 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 TMEM52BQ4KMG9 183 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 SLC45A4Q5BKX6 768 aa12.87□□□□□ -0.35
GPC1-204ENST00000426280 KCTD16Q68DU8 428 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms