RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 HECAQ9UBI9 543 aaPredicted RBP14.38□□□□□ -0.11
HDAC6-206ENST00000426196 CFAP45Q9UL16 551 aa14.38□□□□□ -0.11
HDAC6-206ENST00000426196 PRRC2CQ9Y520 2896 aaKnown RBP14.37□□□□□ -0.11
HDAC6-206ENST00000426196 TMEM110-MUSTN1A8MSY1 372 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 AGFG2O95081 481 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 LIFP15018 202 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 OR1E1P30953 314 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 CD97P48960 835 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 FMO5P49326 533 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 CETN1Q12798 172 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 PDCLQ13371 301 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 C16orf72Q14CZ0 275 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 ALG11Q2TAA5 492 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 LACTB2Q53H82 288 aaPredicted RBP14.37□□□□□ -0.11
HDAC6-206ENST00000426196 CERCAMQ5T4B2 595 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 ATL3Q6DD88 541 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 LRRC31Q6UY01 552 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 ATL2Q8NHH9 583 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 CXorf40AQ8TE69 158 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 SLC35C1Q96A29 364 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 TM6SF2Q9BZW4 377 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 CDH19Q9H159 772 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 ASNSD1Q9NWL6 643 aa14.37□□□□□ -0.11
HDAC6-206ENST00000426196 FCF1Q9Y324 198 aaKnown RBP14.37□□□□□ -0.11
HDAC6-206ENST00000426196 ILVBLA1L0T0 632 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 CAPN5O15484 640 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-206ENST00000426196 GRAP2O75791 330 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 KRT5P13647 590 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 CMA1P23946 247 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 SYKP43405 635 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 SRP54P61011 504 aaKnown RBP14.36□□□□□ -0.11
HDAC6-206ENST00000426196 FKBP3Q00688 224 aaKnown RBP14.36□□□□□ -0.11
HDAC6-206ENST00000426196 GCNT1Q02742 428 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 KLRB1Q12918 225 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 IRF4Q15306 451 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 EFHC2Q5JST6 749 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 EFHC1Q5JVL4 640 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 ENPP7Q6UWV6 458 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 ZNF783Q6ZMS7 281 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 RRAGAQ7L523 313 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 TMPRSS9Q7Z410 1059 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 PIM3Q86V86 326 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 CACNA2D3Q8IZS8 1091 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 TP53I13Q8NBR0 393 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-206ENST00000426196 CCDC112Q8NEF3 446 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 OR6K2Q8NGY2 324 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 TAAR9Q96RI9 348 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 OSBPL1AQ9BXW6 950 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 SEMA6CQ9H3T2 930 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 ATP13A1Q9HD20 1204 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 MBNL1Q9NR56 388 aaKnown RBP14.36□□□□□ -0.11
HDAC6-206ENST00000426196 LRIT1Q9P2V4 623 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 KLQ9UEF7 1012 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 ANKRD36A6QL64 1941 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 MED13Q9UHV7 2174 aa14.36□□□□□ -0.11
HDAC6-206ENST00000426196 KRIT1O00522 736 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 HGSO14964 777 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-206ENST00000426196 AREL1O15033 823 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 MTSS1O43312 755 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 MMP20O60882 483 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 ZMPSTE24O75844 475 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 LETM1O95202 739 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-206ENST00000426196 CPNE6O95741 557 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 UGT2B4P06133 528 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 CCL4P13236 92 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 UGT1A3P35503 534 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 NFATC4Q14934 902 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 KLHL40Q2TBA0 621 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 C14orf28Q4W4Y0 310 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 BRMS1LQ5PSV4 323 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 PLPP6Q8IY26 295 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 SMYD4Q8IYR2 804 aaPredicted RBP14.35□□□□□ -0.11
HDAC6-206ENST00000426196 FAM46DQ8NEK8 389 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 ISG20Q96AZ6 181 aaKnown RBP14.35□□□□□ -0.11
HDAC6-206ENST00000426196 HAPLN3Q96S86 360 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 RBM15Q96T37 977 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC6-206ENST00000426196 TKTL2Q9H0I9 626 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 WDCPQ9H6R7 721 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 MPP6Q9NZW5 540 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 HPSEQ9Y251 543 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 PCDHGA3Q9Y5H0 932 aa14.35□□□□□ -0.11
HDAC6-206ENST00000426196 PRR19A6NJB7 356 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 DRGXA6NNA5 263 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 PMM2O15305 246 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 THAP12O43422 761 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 NUDT21O43809 227 aaKnown RBP14.34□□□□□ -0.11
HDAC6-206ENST00000426196 TNFP01375 233 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 PRKAR1AP10644 381 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 GKP32189 559 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 ARF5P84085 180 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 SEPT6Q14141 434 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 LRRC14Q15048 493 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 POLD3Q15054 466 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-206ENST00000426196 LRRC73Q5JTD7 316 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 ACBD5Q5T8D3 534 aaPredicted RBP14.34□□□□□ -0.11
HDAC6-206ENST00000426196 FHL5Q5TD97 284 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 TAF8Q7Z7C8 310 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 TTC7BQ86TV6 843 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 ZNF683Q8IZ20 524 aa14.34□□□□□ -0.11
HDAC6-206ENST00000426196 APOBEC4Q8WW27 367 aaKnown RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms