RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 CBX4O00257 560 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 RASA4O43374 803 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 TMEM63AO94886 807 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 DLDP09622 509 aaKnown RBP15.84■□□□□ 0.13
SHOX2-202ENST00000425436 MLNP12872 115 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 GEMIN4P57678 1058 aaKnown RBP15.84■□□□□ 0.13
SHOX2-202ENST00000425436 IFI35P80217 286 aaPredicted RBP15.84■□□□□ 0.13
SHOX2-202ENST00000425436 GUCY1A3Q02108 690 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 SEMA5AQ13591 1074 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 EIF4HQ15056 248 aaKnown RBP15.84■□□□□ 0.13
SHOX2-202ENST00000425436 PARP6Q2NL67 630 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 BBS9Q3SYG4 887 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 FNBP1LQ5T0N5 605 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 LINGO4Q6UY18 593 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 ZNF783Q6ZMS7 281 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 C3orf62Q6ZUJ4 267 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 UMODL1-AS1Q8N2C9 162 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 LZTR1Q8N653 840 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 ZNF366Q8N895 744 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 HMCESQ96FZ2 354 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 VAT1Q99536 393 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 LRFN3Q9BTN0 628 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 MAGEH1Q9H213 219 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 ETNK1Q9HBU6 452 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 EIF2B3Q9NR50 452 aaKnown RBP15.84■□□□□ 0.13
SHOX2-202ENST00000425436 THAP10Q9P2Z0 257 aaPredicted RBP15.84■□□□□ 0.13
SHOX2-202ENST00000425436 SLCO3A1Q9UIG8 710 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 ACTL7AQ9Y615 435 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.84■□□□□ 0.13
SHOX2-202ENST00000425436 DFFAO00273 331 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 ADAM23O75077 832 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 MT-CO1P00395 513 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 HLA-EP13747 358 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 HNRNPLP14866 589 aaKnown RBP eCLIP15.84■□□□□ 0.13
SHOX2-202ENST00000425436 IL12RB1P42701 662 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 PAPOLAP51003 745 aaKnown RBP15.84■□□□□ 0.13
SHOX2-202ENST00000425436 FNDC3BQ53EP0 1204 aaKnown RBP15.84■□□□□ 0.13
SHOX2-202ENST00000425436 ANKRD20A2Q5SQ80 823 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 ANKRD20A1Q5TYW2 823 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 ANKRD20A3Q5VUR7 823 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 EXOC3L1Q86VI1 746 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 FBXO36Q8NEA4 188 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 CCDC110Q8TBZ0 833 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 BCAS4Q8TDM0 211 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 MRGPRX3Q96LB0 322 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 ACE2Q9BYF1 805 aaPredicted RBP15.84■□□□□ 0.13
SHOX2-202ENST00000425436 MTG2Q9H4K7 406 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 SPATA6Q9NWH7 488 aaPredicted RBP15.84■□□□□ 0.13
SHOX2-202ENST00000425436 VPS51Q9UID3 782 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 STON1Q9Y6Q2 735 aa15.84■□□□□ 0.13
SHOX2-202ENST00000425436 CACNA1IQ9P0X4 2223 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 NYNRINQ9P2P1 1898 aaKnown RBP15.83■□□□□ 0.12
SHOX2-202ENST00000425436 TCRBV7S3A2A0A539 114 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 GMNCA6NCL1 334 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 MFSD11O43934 449 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 MAP3K6O95382 1288 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 APRTP07741 180 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 PRKCHP24723 683 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 NTSR1P30989 418 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 NDST2P52849 883 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 YBEYP58557 167 aaPredicted RBP15.83■□□□□ 0.12
SHOX2-202ENST00000425436 AP1B1Q10567 949 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 UBAP2Q5T6F2 1119 aaKnown RBP15.83■□□□□ 0.12
SHOX2-202ENST00000425436 SDE2Q6IQ49 451 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 SERPINA13PQ6UXR4 307 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 ARHGAP36Q6ZRI8 547 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 LRRC49Q8IUZ0 686 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 CCNJLQ8IV13 435 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 ARHGAP12Q8IWW6 846 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 CCDC13Q8IYE1 715 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 SPEM1Q8N4L4 309 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 CCNYQ8ND76 341 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 KCNV2Q8TDN2 545 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 MYO19Q96H55 970 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 CYTH2Q99418 400 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 C2orf49Q9BVC5 232 aaPredicted RBP15.83■□□□□ 0.12
SHOX2-202ENST00000425436 ACSS3Q9H6R3 686 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 PSMC3IPQ9P2W1 217 aaPredicted RBP15.83■□□□□ 0.12
SHOX2-202ENST00000425436 TRHDEQ9UKU6 1024 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 TEX264Q9Y6I9 313 aa15.83■□□□□ 0.12
SHOX2-202ENST00000425436 TTC34A8MYJ7 566 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 CHURC1-FNTBB4DL54 471 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 K7ERQ8 282 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 KDELR3O43731 214 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 ATG13O75143 517 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 ZMPSTE24O75844 475 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 ASLP04424 464 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 STX2P32856 288 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 SLC18A1P54219 525 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 GPX6P59796 221 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 ST8SIA6P61647 398 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 ARF5P84085 180 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 SATB1Q01826 763 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 SULT2A1Q06520 285 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 PPIDQ08752 370 aaKnown RBP15.82■□□□□ 0.12
SHOX2-202ENST00000425436 SERINC3Q13530 473 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 FASTKD3Q14CZ7 662 aaKnown RBP15.82■□□□□ 0.12
SHOX2-202ENST00000425436 PARP15Q460N3 678 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 AFMIDQ63HM1 303 aa15.82■□□□□ 0.12
SHOX2-202ENST00000425436 TMEM92Q6UXU6 159 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms