RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 UNGP13051 313 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-209ENST00000425239 PRKCSHP14314 528 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-209ENST00000425239 TSHRP16473 764 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 ERCC5P28715 1186 aaPredicted RBP15.18■□□□□ 0.02
ATG4B-209ENST00000425239 SNRPD1P62314 119 aaKnown RBP15.18■□□□□ 0.02
ATG4B-209ENST00000425239 VAC14Q08AM6 782 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 NR0B2Q15466 257 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 PRRT3Q5FWE3 981 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 C3orf38Q5JPI3 329 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 LRRC73Q5JTD7 316 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 GDPD4Q6W3E5 623 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 STRADAQ7RTN6 431 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 PHLDB2Q86SQ0 1253 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 CLEC14AQ86T13 490 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 TTC7BQ86TV6 843 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 PHACTR4Q8IZ21 702 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 NETO2Q8NC67 525 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 PCDHB18PQ96TA0 734 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 IL12RB2Q99665 862 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 OSBPL1AQ9BXW6 950 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 TTYH3Q9C0H2 523 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 GANQ9H2C0 597 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 THSD1Q9NS62 852 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 SPASTQ9UBP0 616 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 RABGEF1Q9UJ41 708 aa15.18■□□□□ 0.02
ATG4B-209ENST00000425239 K7ENP7 123 aa15.17■□□□□ 0.02
ATG4B-209ENST00000425239 MUSKO15146 869 aa15.17■□□□□ 0.02
ATG4B-209ENST00000425239 PLEKP08567 350 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-209ENST00000425239 RFC1P35251 1148 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-209ENST00000425239 ETFBP38117 255 aa15.17■□□□□ 0.02
ATG4B-209ENST00000425239 EIF4A3P38919 411 aaKnown RBP15.17■□□□□ 0.02
ATG4B-209ENST00000425239 JAM2P57087 298 aa15.17■□□□□ 0.02
ATG4B-209ENST00000425239 CDR2Q01850 454 aa15.17■□□□□ 0.02
ATG4B-209ENST00000425239 CDO1Q16878 200 aa15.17■□□□□ 0.02
ATG4B-209ENST00000425239 INO80DQ53TQ3 878 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-209ENST00000425239 INO80CQ6PI98 192 aaPredicted RBP15.17■□□□□ 0.02
ATG4B-209ENST00000425239 RBM44Q6ZP01 1051 aaKnown RBP15.17■□□□□ 0.02
ATG4B-209ENST00000425239 ZNF677Q86XU0 584 aa15.17■□□□□ 0.02
ATG4B-209ENST00000425239 SLC30A5Q8TAD4 765 aa15.17■□□□□ 0.02
ATG4B-209ENST00000425239 NTAN1Q96AB6 310 aa15.17■□□□□ 0.02
ATG4B-209ENST00000425239 FUBP1Q96AE4 644 aaKnown RBP15.17■□□□□ 0.02
ATG4B-209ENST00000425239 EVA1BQ9NVM1 165 aa15.17■□□□□ 0.02
ATG4B-209ENST00000425239 DKK3Q9UBP4 350 aa15.17■□□□□ 0.02
ATG4B-209ENST00000425239 APOBEC3BQ9UH17 382 aaKnown RBP15.17■□□□□ 0.02
ATG4B-209ENST00000425239 LRP4O75096 1905 aa15.17■□□□□ 0.02
ATG4B-209ENST00000425239 TCRBV5S1A1TA0A578 114 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 TOR1BO14657 336 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 EPHB6O15197 1021 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 INSIG1O15503 277 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 RAMP2O60895 175 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 TM7SF2O76062 418 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 TMCC1O94876 653 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 KLK7P49862 253 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 GSCP56915 257 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-209ENST00000425239 GEMIN4P57678 1058 aaKnown RBP15.16■□□□□ 0.02
ATG4B-209ENST00000425239 CLN3Q13286 438 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 LY6DQ14210 128 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 PTK2BQ14289 1009 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 POLD3Q15054 466 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-209ENST00000425239 CYTH1Q15438 398 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 KLHL40Q2TBA0 621 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 ARL13BQ3SXY8 428 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 TMEM52BQ4KMG9 183 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 TCP11X2Q5H9J9 407 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 BROXQ5VW32 411 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 KCTD16Q68DU8 428 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 RWDD4Q6NW29 188 aaKnown RBP15.16■□□□□ 0.02
ATG4B-209ENST00000425239 MACC1Q6ZN28 852 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 VPS36Q86VN1 386 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 FAM114A1Q8IWE2 563 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 PYROXD2Q8N2H3 581 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 RYBPQ8N488 228 aaPredicted RBP15.16■□□□□ 0.02
ATG4B-209ENST00000425239 ARHGEF26Q96DR7 871 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 CCDC3Q9BQI4 270 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 CPEB1Q9BZB8 566 aaKnown RBP15.16■□□□□ 0.02
ATG4B-209ENST00000425239 PADI4Q9UM07 663 aa15.16■□□□□ 0.02
ATG4B-209ENST00000425239 MYO18BQ8IUG5 2567 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 TSPAN11A1L157 253 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 CAPN8A6NHC0 703 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 NEMP1O14524 444 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 NOBOXO60393 691 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 RBMS1P29558 406 aaKnown RBP15.15■□□□□ 0.02
ATG4B-209ENST00000425239 SDC4P31431 198 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 PEX5P50542 639 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 HK3P52790 923 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 AGERQ15109 404 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 TPD52L1Q16890 204 aaPredicted RBP15.15■□□□□ 0.02
ATG4B-209ENST00000425239 WSCD2Q2TBF2 565 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 WDR59Q6PJI9 974 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 RTL3Q8N8U3 475 aaKnown RBP15.15■□□□□ 0.02
ATG4B-209ENST00000425239 WDR36Q8NI36 951 aaKnown RBP15.15■□□□□ 0.02
ATG4B-209ENST00000425239 HCAR2Q8TDS4 363 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 FAM172AQ8WUF8 416 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 TBC1D31Q96DN5 1066 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 EPAS1Q99814 870 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.15■□□□□ 0.02
ATG4B-209ENST00000425239 CLSTN2Q9H4D0 955 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 LHX3Q9UBR4 397 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 COL12A1Q99715 3063 aa15.15■□□□□ 0.02
ATG4B-209ENST00000425239 SCN8AQ9UQD0 1980 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms