RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 TMEM110-MUSTN1A8MSY1 372 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 E7ENQ6 273 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 POLR1CO15160 346 aaPredicted RBP6.41□□□□□ -1.38
SDCBP-203ENST00000424270 B4GAT1O43505 415 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 TSPAN6O43657 245 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 ATP9BO43861 1147 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 PRICKLE3O43900 615 aaPredicted RBP6.41□□□□□ -1.38
SDCBP-203ENST00000424270 EXOC3O60645 756 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 LEFTY1O75610 366 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 FURINP09958 794 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 CCNYL3P0C7X3 344 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 CAPN3P20807 821 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 AP3M2P53677 418 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 ITGA1P56199 1179 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 MAZP56270 477 aaKnown RBP6.41□□□□□ -1.38
SDCBP-203ENST00000424270 SRP54P61011 504 aaKnown RBP6.41□□□□□ -1.38
SDCBP-203ENST00000424270 KRT83P78385 493 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 FOXM1Q08050 763 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 SEMA5AQ13591 1074 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 KYNUQ16719 465 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 ALG11Q2TAA5 492 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 RILPL1Q5EBL4 403 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 RABGAP1LQ5R372 815 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 CPZQ66K79 652 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 SLC6A19Q695T7 634 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 SPECC1LQ69YQ0 1117 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 SPOPLQ6IQ16 392 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 C6orf15Q6UXA7 325 aaPredicted RBP6.41□□□□□ -1.38
SDCBP-203ENST00000424270 SLC47A2Q86VL8 602 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 FJX1Q86VR8 437 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 XYLT1Q86Y38 959 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 APLFQ8IW19 511 aaPredicted RBP6.41□□□□□ -1.38
SDCBP-203ENST00000424270 PARP9Q8IXQ6 854 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 CCAR2Q8N163 923 aaKnown RBP6.41□□□□□ -1.38
SDCBP-203ENST00000424270 SH2D3CQ8N5H7 860 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 XXYLT1Q8NBI6 393 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 CHST14Q8NCH0 376 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 GPR156Q8NFN8 814 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 FBXO18Q8NFZ0 1043 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 OR4D9Q8NGE8 314 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 CXorf40AQ8TE69 158 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 ZNF516Q92618 1163 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 MYEOVQ96EZ4 313 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 KLF6Q99612 283 aaPredicted RBP6.41□□□□□ -1.38
SDCBP-203ENST00000424270 STRA6Q9BX79 667 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 VRTNQ9H8Y1 702 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 AGPAT4Q9NRZ5 378 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 HESX1Q9UBX0 185 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 PNMA8BQ9ULN7 279 aaPredicted RBP6.41□□□□□ -1.38
SDCBP-203ENST00000424270 ITM2BQ9Y287 266 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 VPS9D1Q9Y2B5 631 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 FADS3Q9Y5Q0 445 aa6.41□□□□□ -1.38
SDCBP-203ENST00000424270 COPG1Q9Y678 874 aaKnown RBP6.41□□□□□ -1.38
SDCBP-203ENST00000424270 NYNRINQ9P2P1 1898 aaKnown RBP6.41□□□□□ -1.38
SDCBP-203ENST00000424270 PIK3R2O00459 728 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 CREG1O75629 220 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 TM7SF2O76062 418 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 F9P00740 461 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 RPN1P04843 607 aaKnown RBP6.4□□□□□ -1.38
SDCBP-203ENST00000424270 TACR2P21452 398 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 F8A1P23610 371 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 RRM1P23921 792 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 NFKBIAP25963 317 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 HTR1EP28566 365 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 IGFALSP35858 605 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 TXLNAP40222 546 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 ASPAP45381 313 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 GLRBP48167 497 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 B4GALNT1Q00973 533 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 PTK2Q05397 1052 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 HLTFQ14527 1009 aaKnown RBP eCLIP6.4□□□□□ -1.38
SDCBP-203ENST00000424270 CLPPQ16740 277 aaPredicted RBP6.4□□□□□ -1.38
SDCBP-203ENST00000424270 GOLGA7BQ2TAP0 167 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 ARL6IP4Q66PJ3 421 aaKnown RBP6.4□□□□□ -1.38
SDCBP-203ENST00000424270 LYSMD3Q7Z3D4 306 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 SKAP1Q86WV1 359 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 RASGRP3Q8IV61 690 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 SFTPA2Q8IWL1 248 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 NELFCDQ8IXH7 590 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 CCDC65Q8IXS2 484 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 Q8NA96 180 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 OR2A12Q8NGT7 310 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 TAF4BQ92750 862 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 TATDN2Q93075 761 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 AZIN2Q96A70 460 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 ARHGEF26Q96DR7 871 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 SERPINB11Q96P15 392 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 RPRD1AQ96P16 312 aaPredicted RBP6.4□□□□□ -1.38
SDCBP-203ENST00000424270 C1QTNF2Q9BXJ5 285 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 FGFBP2Q9BYJ0 223 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 ING2Q9H160 280 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 ZDHHC6Q9H6R6 413 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 OLFML3Q9NRN5 406 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 SUCOQ9UBS9 1254 aaKnown RBP6.4□□□□□ -1.38
SDCBP-203ENST00000424270 KLHL3Q9UH77 587 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 SLC12A6Q9UHW9 1150 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 PCDHGB6Q9Y5F9 930 aa6.4□□□□□ -1.38
SDCBP-203ENST00000424270 PCDHGA9Q9Y5G4 932 aaKnown RBP6.4□□□□□ -1.38
SDCBP-203ENST00000424270 SPG11Q96JI7 2443 aa6.4□□□□□ -1.39
SDCBP-203ENST00000424270 CROCCQ5TZA2 2017 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms