RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 DSC2Q02487 901 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 NIPAL4Q0D2K0 466 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 WASHC5Q12768 1159 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 CNTN1Q12860 1018 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 SNX1Q13596 522 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 BYSLQ13895 437 aaKnown RBP9.38□□□□□ -0.91
PDGFC-202ENST00000422544 SIX1Q15475 284 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-202ENST00000422544 TTC31Q49AM3 519 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-202ENST00000422544 TEX44Q53QW1 395 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 ZNF805Q5CZA5 627 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-202ENST00000422544 CDKL3Q8IVW4 592 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-202ENST00000422544 RASGEF1CQ8N431 466 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 DEFB119Q8N690 84 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 SLC35B2Q8TB61 432 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 C1orf54Q8WWF1 131 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 GAB3Q8WWW8 586 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 NKD2Q969F2 451 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-202ENST00000422544 TOE1Q96GM8 510 aaKnown RBP9.38□□□□□ -0.91
PDGFC-202ENST00000422544 LRIG1Q96JA1 1093 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 SPACA7Q96KW9 195 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 KLHL32Q96NJ5 620 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 NUDCD1Q96RS6 583 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 NAPGQ99747 312 aaPredicted RBP9.38□□□□□ -0.91
PDGFC-202ENST00000422544 CPEB1Q9BZB8 566 aaKnown RBP9.38□□□□□ -0.91
PDGFC-202ENST00000422544 POLR1EQ9GZS1 481 aaKnown RBP9.38□□□□□ -0.91
PDGFC-202ENST00000422544 IRF2BPLQ9H1B7 796 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 SUV39H2Q9H5I1 410 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 USP29Q9HBJ7 922 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 DYRK4Q9NR20 520 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 DLL3Q9NYJ7 618 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 SMARCAL1Q9NZC9 954 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 DNPEPQ9ULA0 475 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 ATP8A1Q9Y2Q0 1164 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 PCDHGC4Q9Y5F7 938 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 LOC400499M0QZD8 3231 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 RALGAPA1Q6GYQ0 2036 aa9.38□□□□□ -0.91
PDGFC-202ENST00000422544 SMG1Q96Q15 3661 aaKnown RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 NYNRINQ9P2P1 1898 aaKnown RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 BCLAF3A2AJT9 711 aaKnown RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 FAM47DPA6NHR8 397 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 C16orf96A6NNT2 1141 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 KCNN4O15554 427 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 MTSS1O43312 755 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 LIASO43766 372 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 IGLV3-19P01714 112 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 TIMP2P16035 220 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 TCP1P17987 556 aaKnown RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 ITGB7P26010 798 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 CASQ1P31415 396 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 ACSL1P33121 698 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 MAPK8P45983 427 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 AP1S1P61966 158 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 ETF1P62495 437 aaKnown RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 BCL2L1Q07817 233 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 SFSWAPQ12872 951 aaKnown RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 SIM2Q14190 667 aaPredicted RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 IHHQ14623 411 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 GRM3Q14832 879 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 PAPD7Q5XG87 772 aaKnown RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 FBXL19Q6PCT2 694 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 ZC3H14Q6PJT7 736 aaKnown RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 SYT10Q6XYQ8 523 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 PRR23BQ6ZRT6 265 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 USP30Q70CQ3 517 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 ERN2Q76MJ5 926 aaKnown RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 CEP68Q76N32 757 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 PID1Q7Z2X4 250 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 TTC7BQ86TV6 843 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 KBTBD6Q86V97 674 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 ZNF567Q8N184 647 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 DCLK2Q8N568 766 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 FAM71DQ8N9W8 422 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 OR14C36Q8NHC7 312 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 ARRDC2Q8TBH0 407 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 MAIP1Q8WWC4 291 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 TEKT5Q96M29 485 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 ZNF641Q96N77 438 aaPredicted RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 TUBGCP5Q96RT8 1024 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 GPR174Q9BXC1 333 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 OSBPL1AQ9BXW6 950 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 HDAC8Q9BY41 377 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 BTBD1Q9H0C5 482 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 ATP13A3Q9H7F0 1226 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 HAUS2Q9NVX0 235 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 WSB2Q9NYS7 404 aaPredicted RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 KLHL8Q9P2G9 620 aaPredicted RBP9.37□□□□□ -0.91
PDGFC-202ENST00000422544 AMACRQ9UHK6 382 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 ITPR1Q14643 2758 aa9.37□□□□□ -0.91
PDGFC-202ENST00000422544 CKAP5Q14008 2032 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.36□□□□□ -0.91
PDGFC-202ENST00000422544 F5H423 210 aaPredicted RBP9.36□□□□□ -0.91
PDGFC-202ENST00000422544 CES2O00748 559 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 TRAFD1O14545 582 aaPredicted RBP9.36□□□□□ -0.91
PDGFC-202ENST00000422544 NDUFS2O75306 463 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 MMP2P08253 660 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 PRLRP16471 622 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 ITIH2P19823 946 aa9.36□□□□□ -0.91
PDGFC-202ENST00000422544 CES1P23141 567 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms