RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 FAXCQ5TGI0 409 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 GJB7Q6PEY0 223 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 TRIM65Q6PJ69 517 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 LVRNQ6Q4G3 990 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 ZDHHC17Q8IUH5 632 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 FSTL5Q8N475 847 aaPredicted RBP10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 TP53I13Q8NBR0 393 aaPredicted RBP10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 OR6K2Q8NGY2 324 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 HTR3CQ8WXA8 447 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 SHC3Q92529 594 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 ARHGEF26Q96DR7 871 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 TMEM74Q96NL1 305 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 GFM1Q96RP9 751 aaKnown RBP10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 FUCA2Q9BTY2 467 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 CPEB1Q9BZB8 566 aaKnown RBP10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 MBNL1Q9NR56 388 aaKnown RBP10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 HECAQ9UBI9 543 aaPredicted RBP10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 PISDQ9UG56 409 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 STAP1Q9ULZ2 295 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 LOXL2Q9Y4K0 774 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 PAXBP1Q9Y5B6 917 aa10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.35□□□□□ -0.75
TNFAIP3-202ENST00000420009 NBPF19A0A087WUL8 3843 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 GNA14O95837 355 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 F9P00740 461 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 JMJD7P0C870 316 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 BMP6P22004 513 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 EIF4A3P38919 411 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 SULT1E1P49888 294 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 HK3P52790 923 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 CCL7P80098 99 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 TLE1Q04724 770 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 DEUP1Q05D60 604 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 ZFP36L1Q07352 338 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 ELOCQ15369 112 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 TBR1Q16650 682 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 ALG11Q2TAA5 492 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 SLC25A52Q3SY17 297 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 SMYD5Q6GMV2 418 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 BNIPLQ7Z465 357 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 VASH2Q86V25 355 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 VPS36Q86VN1 386 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 DTX1Q86Y01 620 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 OR2AP1Q8NGE2 309 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 NELFBQ8WX92 580 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 ARHGEF2Q92974 986 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 FAM81BQ96LP2 452 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 HAPLN3Q96S86 360 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 TBCBQ99426 244 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 EPAS1Q99814 870 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 C1QTNF7Q9BXJ2 289 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 OSBPL1AQ9BXW6 950 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 ZYG11BQ9C0D3 744 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 LRRN3Q9H3W5 708 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 WDR70Q9NW82 654 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 TMEM51Q9NW97 253 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 GEMIN8Q9NWZ8 242 aaKnown RBP10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 SIRPGQ9P1W8 387 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 ANKMY1Q9P2S6 941 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 GULP1Q9UBP9 304 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 MAN1B1Q9UKM7 699 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 ATP6V1DQ9Y5K8 247 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 DOCK4Q8N1I0 1966 aa10.34□□□□□ -0.75
TNFAIP3-202ENST00000420009 DOPEY2Q9Y3R5 2298 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 LRP4O75096 1905 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 FLNCQ14315 2725 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 PRAMEF33A0A0G2JMD5 474 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 PPP1R3GB7ZBB8 358 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 BHMG1C9JSJ3 638 aaPredicted RBP10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 PRAMEF10O60809 474 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 PPFIA2O75334 1257 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 TM7SF2O76062 418 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 GSRP00390 522 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 NTRK1P04629 796 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 UGT2B4P06133 528 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 ALPIP09923 528 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 ITIH1P19827 911 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 ACVRL1P37023 503 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 SCNN1AP37088 669 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 ETFBP38117 255 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 USP8P40818 1118 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 ETV5P41161 510 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 PEX5P50542 639 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 BLKP51451 505 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 SNX16P57768 344 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 APBA1Q02410 837 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 DSG2Q14126 1118 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 CLCA4Q14CN2 919 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 IRF4Q15306 451 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 ARHGAP44Q17R89 818 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 LRRC73Q5JTD7 316 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 MANEAQ5SRI9 462 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 KLHL10Q6JEL2 608 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 TRNP1Q6NT89 227 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 CCNJLQ8IV13 435 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 DRC7Q8IY82 874 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 OR6C4Q8NGE1 309 aa10.33□□□□□ -0.76
TNFAIP3-202ENST00000420009 SCG3Q8WXD2 468 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms